Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMOQ99835 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMOQ99835 AC008406.3-201ENST00000620001 1374 ntBASIC24.06■■□□□ 1.44
SMOQ99835 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SMOQ99835 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMOQ99835 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.06■■□□□ 1.44
SMOQ99835 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
SMOQ99835 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMOQ99835 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMOQ99835 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.06■■□□□ 1.44
SMOQ99835 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMOQ99835 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMOQ99835 AC004812.2-201ENST00000611079 2094 ntBASIC24.04■■□□□ 1.44
SMOQ99835 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.04■■□□□ 1.44
SMOQ99835 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMOQ99835 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMOQ99835 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMOQ99835 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMOQ99835 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SMOQ99835 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMOQ99835 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.03■■□□□ 1.44
SMOQ99835 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SMOQ99835 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMOQ99835 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMOQ99835 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.03■■□□□ 1.44
SMOQ99835 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.03■■□□□ 1.44
SMOQ99835 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.03■■□□□ 1.44
SMOQ99835 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMOQ99835 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
SMOQ99835 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
SMOQ99835 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SMOQ99835 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.02■■□□□ 1.44
SMOQ99835 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMOQ99835 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMOQ99835 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SMOQ99835 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMOQ99835 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.02■■□□□ 1.44
SMOQ99835 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMOQ99835 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.02■■□□□ 1.44
SMOQ99835 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SMOQ99835 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
SMOQ99835 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMOQ99835 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
SMOQ99835 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMOQ99835 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMOQ99835 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.01■■□□□ 1.43
SMOQ99835 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMOQ99835 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SMOQ99835 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMOQ99835 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.01■■□□□ 1.43
SMOQ99835 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.01■■□□□ 1.43
SMOQ99835 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMOQ99835 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.01■■□□□ 1.43
SMOQ99835 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.01■■□□□ 1.43
SMOQ99835 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SMOQ99835 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMOQ99835 AL136116.3-201ENST00000402907 1138 ntBASIC24■■□□□ 1.43
SMOQ99835 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24■■□□□ 1.43
SMOQ99835 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SMOQ99835 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SMOQ99835 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24■■□□□ 1.43
SMOQ99835 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SMOQ99835 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24■■□□□ 1.43
SMOQ99835 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.99■■□□□ 1.43
SMOQ99835 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.99■■□□□ 1.43
SMOQ99835 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMOQ99835 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.99■■□□□ 1.43
SMOQ99835 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.99■■□□□ 1.43
SMOQ99835 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SMOQ99835 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.99■■□□□ 1.43
SMOQ99835 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMOQ99835 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMOQ99835 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMOQ99835 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMOQ99835 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMOQ99835 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SMOQ99835 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.98■■□□□ 1.43
SMOQ99835 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.98■■□□□ 1.43
SMOQ99835 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.98■■□□□ 1.43
SMOQ99835 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMOQ99835 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMOQ99835 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMOQ99835 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMOQ99835 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMOQ99835 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
SMOQ99835 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SMOQ99835 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.97■■□□□ 1.43
SMOQ99835 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMOQ99835 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMOQ99835 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.96■■□□□ 1.43
SMOQ99835 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMOQ99835 AC009102.2-201ENST00000606772 1639 ntBASIC23.96■■□□□ 1.43
SMOQ99835 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMOQ99835 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMOQ99835 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.96■■□□□ 1.43
SMOQ99835 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMOQ99835 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.96■■□□□ 1.43
SMOQ99835 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
SMOQ99835 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMOQ99835 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms