Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRPF38AQ8NAV1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.4■■□□□ 1.82
PRPF38AQ8NAV1 AC099791.2-201ENST00000605725 427 ntBASIC26.4■■□□□ 1.82
PRPF38AQ8NAV1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.4■■□□□ 1.82
PRPF38AQ8NAV1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.39■■□□□ 1.82
PRPF38AQ8NAV1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
PRPF38AQ8NAV1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
PRPF38AQ8NAV1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
PRPF38AQ8NAV1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRPF38AQ8NAV1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PRPF38AQ8NAV1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 C17orf82-201ENST00000623772 1530 ntBASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 AP003733.4-201ENST00000623785 1697 ntBASIC26.38■■□□□ 1.81
PRPF38AQ8NAV1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.37■■□□□ 1.81
PRPF38AQ8NAV1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRPF38AQ8NAV1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PRPF38AQ8NAV1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.36■■□□□ 1.81
PRPF38AQ8NAV1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRPF38AQ8NAV1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRPF38AQ8NAV1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.36■■□□□ 1.81
PRPF38AQ8NAV1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF38AQ8NAV1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 SERBP1P1-201ENST00000396021 1160 ntBASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 ZNRF2P3-201ENST00000424200 374 ntBASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 AL136967.2-201ENST00000623968 743 ntBASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF38AQ8NAV1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 AC241377.3-202ENST00000626088 1088 ntBASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 AC241585.3-202ENST00000628937 1088 ntBASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 AC245100.8-202ENST00000629247 1058 ntBASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF38AQ8NAV1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.8
PRPF38AQ8NAV1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PRPF38AQ8NAV1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PRPF38AQ8NAV1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PRPF38AQ8NAV1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 ALDH1A3-203ENST00000557963 1670 ntBASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 AL138724.1-201ENST00000606771 1088 ntBASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF38AQ8NAV1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF38AQ8NAV1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF38AQ8NAV1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF38AQ8NAV1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
PRPF38AQ8NAV1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF38AQ8NAV1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF38AQ8NAV1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms