Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK2Q86Y07 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK2Q86Y07 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK2Q86Y07 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 ANOS2P-203ENST00000472227 1816 ntBASIC21.06■□□□□ 0.96
VRK2Q86Y07 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.06■□□□□ 0.96
VRK2Q86Y07 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VRK2Q86Y07 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK2Q86Y07 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK2Q86Y07 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK2Q86Y07 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 MIR4508-201ENST00000584178 70 ntBASIC21.05■□□□□ 0.96
VRK2Q86Y07 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 ALDH1A3-203ENST00000557963 1670 ntBASIC21.05■□□□□ 0.96
VRK2Q86Y07 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VRK2Q86Y07 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.04■□□□□ 0.96
VRK2Q86Y07 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VRK2Q86Y07 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK2Q86Y07 KRT8P33-201ENST00000508125 1423 ntBASIC21.04■□□□□ 0.96
VRK2Q86Y07 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK2Q86Y07 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VRK2Q86Y07 AC103834.1-201ENST00000520383 144 ntBASIC21.04■□□□□ 0.96
VRK2Q86Y07 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRK2Q86Y07 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.04■□□□□ 0.96
VRK2Q86Y07 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
VRK2Q86Y07 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VRK2Q86Y07 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK2Q86Y07 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK2Q86Y07 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK2Q86Y07 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK2Q86Y07 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VRK2Q86Y07 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.03■□□□□ 0.96
VRK2Q86Y07 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VRK2Q86Y07 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK2Q86Y07 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK2Q86Y07 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK2Q86Y07 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK2Q86Y07 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK2Q86Y07 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.02■□□□□ 0.96
VRK2Q86Y07 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK2Q86Y07 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VRK2Q86Y07 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VRK2Q86Y07 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK2Q86Y07 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VRK2Q86Y07 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.01■□□□□ 0.95
VRK2Q86Y07 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.01■□□□□ 0.95
VRK2Q86Y07 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VRK2Q86Y07 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.01■□□□□ 0.95
VRK2Q86Y07 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK2Q86Y07 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VRK2Q86Y07 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21■□□□□ 0.95
VRK2Q86Y07 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VRK2Q86Y07 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VRK2Q86Y07 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21■□□□□ 0.95
VRK2Q86Y07 AC012676.1-201ENST00000574705 1949 ntBASIC21■□□□□ 0.95
VRK2Q86Y07 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.99■□□□□ 0.95
VRK2Q86Y07 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.99■□□□□ 0.95
VRK2Q86Y07 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VRK2Q86Y07 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.99■□□□□ 0.95
VRK2Q86Y07 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VRK2Q86Y07 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK2Q86Y07 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VRK2Q86Y07 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VRK2Q86Y07 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 AC103724.3-201ENST00000564481 992 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms