Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC9A3P48764 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC9A3P48764 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 C9orf163-202ENST00000624034 2573 ntBASIC20.76■□□□□ 0.91
SLC9A3P48764 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC9A3P48764 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC9A3P48764 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3P48764 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC9A3P48764 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC9A3P48764 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC9A3P48764 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.76■□□□□ 0.91
SLC9A3P48764 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
SLC9A3P48764 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3P48764 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3P48764 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC9A3P48764 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3P48764 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3P48764 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3P48764 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC9A3P48764 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC9A3P48764 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC9A3P48764 AL022069.1-201ENST00000568025 1636 ntBASIC20.75■□□□□ 0.91
SLC9A3P48764 AL117328.2-201ENST00000624617 1940 ntBASIC20.74■□□□□ 0.91
SLC9A3P48764 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC9A3P48764 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC9A3P48764 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC9A3P48764 AC139795.1-202ENST00000500444 432 ntBASIC20.74■□□□□ 0.91
SLC9A3P48764 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SLC9A3P48764 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC9A3P48764 NTF6A-201ENST00000591175 560 ntBASIC20.74■□□□□ 0.91
SLC9A3P48764 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC9A3P48764 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC9A3P48764 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC9A3P48764 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
SLC9A3P48764 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3P48764 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SLC9A3P48764 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC9A3P48764 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC9A3P48764 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC9A3P48764 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3P48764 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3P48764 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC9A3P48764 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
SLC9A3P48764 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
SLC9A3P48764 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC9A3P48764 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC9A3P48764 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC9A3P48764 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3P48764 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC9A3P48764 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SLC9A3P48764 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3P48764 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC9A3P48764 DUX4L18-201ENST00000553347 1267 ntBASIC20.69■□□□□ 0.9
SLC9A3P48764 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3P48764 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.69■□□□□ 0.9
SLC9A3P48764 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC9A3P48764 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3P48764 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
SLC9A3P48764 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3P48764 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3P48764 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SLC9A3P48764 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC9A3P48764 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC9A3P48764 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3P48764 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3P48764 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC9A3P48764 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms