Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.58■□□□□ 0.73
CSF1P09603 DUSP8P3-201ENST00000399571 1760 ntBASIC19.58■□□□□ 0.73
CSF1P09603 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CSF1P09603 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
CSF1P09603 AC137767.1-201ENST00000602918 1920 ntBASIC19.58■□□□□ 0.72
CSF1P09603 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSF1P09603 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CSF1P09603 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSF1P09603 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSF1P09603 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.58■□□□□ 0.72
CSF1P09603 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSF1P09603 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CSF1P09603 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.57■□□□□ 0.72
CSF1P09603 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 GUSBP5-202ENST00000510805 1989 ntBASIC19.57■□□□□ 0.72
CSF1P09603 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSF1P09603 C1orf229-201ENST00000623686 2258 ntBASIC19.56■□□□□ 0.72
CSF1P09603 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.56■□□□□ 0.72
CSF1P09603 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.56■□□□□ 0.72
CSF1P09603 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.56■□□□□ 0.72
CSF1P09603 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.56■□□□□ 0.72
CSF1P09603 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.56■□□□□ 0.72
CSF1P09603 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 AC092068.2-201ENST00000590491 1708 ntBASIC19.56■□□□□ 0.72
CSF1P09603 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSF1P09603 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSF1P09603 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CSF1P09603 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CSF1P09603 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSF1P09603 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSF1P09603 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSF1P09603 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.55■□□□□ 0.72
CSF1P09603 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSF1P09603 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
CSF1P09603 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.55■□□□□ 0.72
CSF1P09603 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CSF1P09603 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.55■□□□□ 0.72
CSF1P09603 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
CSF1P09603 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSF1P09603 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.54■□□□□ 0.72
CSF1P09603 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSF1P09603 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CSF1P09603 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSF1P09603 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSF1P09603 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSF1P09603 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CSF1P09603 ECEL1P1-201ENST00000373592 1742 ntBASIC19.54■□□□□ 0.72
CSF1P09603 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CSF1P09603 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSF1P09603 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSF1P09603 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.53■□□□□ 0.72
CSF1P09603 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSF1P09603 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CSF1P09603 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.52■□□□□ 0.72
CSF1P09603 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 RARRES2P1-201ENST00000474487 481 ntBASIC19.52■□□□□ 0.72
CSF1P09603 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSF1P09603 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
CSF1P09603 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSF1P09603 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSF1P09603 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CSF1P09603 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CSF1P09603 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.51■□□□□ 0.71
CSF1P09603 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.51■□□□□ 0.71
CSF1P09603 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CSF1P09603 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSF1P09603 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSF1P09603 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms