Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.08■■□□□ 1.44
BEST1O76090 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
BEST1O76090 AC141586.4-201ENST00000624558 1573 ntBASIC24.07■■□□□ 1.44
BEST1O76090 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
BEST1O76090 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.07■■□□□ 1.44
BEST1O76090 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
BEST1O76090 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
BEST1O76090 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.06■■□□□ 1.44
BEST1O76090 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.06■■□□□ 1.44
BEST1O76090 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.06■■□□□ 1.44
BEST1O76090 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
BEST1O76090 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.06■■□□□ 1.44
BEST1O76090 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
BEST1O76090 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
BEST1O76090 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
BEST1O76090 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
BEST1O76090 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
BEST1O76090 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
BEST1O76090 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.05■■□□□ 1.44
BEST1O76090 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
BEST1O76090 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
BEST1O76090 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
BEST1O76090 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
BEST1O76090 AC008406.3-201ENST00000620001 1374 ntBASIC24.04■■□□□ 1.44
BEST1O76090 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.04■■□□□ 1.44
BEST1O76090 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
BEST1O76090 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.03■■□□□ 1.44
BEST1O76090 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
BEST1O76090 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.03■■□□□ 1.44
BEST1O76090 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BEST1O76090 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
BEST1O76090 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
BEST1O76090 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.02■■□□□ 1.44
BEST1O76090 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.02■■□□□ 1.44
BEST1O76090 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
BEST1O76090 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.02■■□□□ 1.44
BEST1O76090 ABCB10P4-201ENST00000566803 2184 ntBASIC24.02■■□□□ 1.44
BEST1O76090 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
BEST1O76090 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.02■■□□□ 1.44
BEST1O76090 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
BEST1O76090 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
BEST1O76090 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.01■■□□□ 1.43
BEST1O76090 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.01■■□□□ 1.43
BEST1O76090 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.01■■□□□ 1.43
BEST1O76090 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
BEST1O76090 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
BEST1O76090 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
BEST1O76090 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.01■■□□□ 1.43
BEST1O76090 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
BEST1O76090 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
BEST1O76090 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24■■□□□ 1.43
BEST1O76090 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24■■□□□ 1.43
BEST1O76090 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24■■□□□ 1.43
BEST1O76090 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24■■□□□ 1.43
BEST1O76090 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
BEST1O76090 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
BEST1O76090 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24■■□□□ 1.43
BEST1O76090 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24■■□□□ 1.43
BEST1O76090 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24■■□□□ 1.43
BEST1O76090 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.99■■□□□ 1.43
BEST1O76090 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
BEST1O76090 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BEST1O76090 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BEST1O76090 AL136116.3-201ENST00000402907 1138 ntBASIC23.99■■□□□ 1.43
BEST1O76090 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.99■■□□□ 1.43
BEST1O76090 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
BEST1O76090 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
BEST1O76090 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
BEST1O76090 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.98■■□□□ 1.43
BEST1O76090 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
BEST1O76090 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
BEST1O76090 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.98■■□□□ 1.43
BEST1O76090 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.98■■□□□ 1.43
BEST1O76090 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
BEST1O76090 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BEST1O76090 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BEST1O76090 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.97■■□□□ 1.43
BEST1O76090 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
BEST1O76090 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
BEST1O76090 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.97■■□□□ 1.43
BEST1O76090 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
BEST1O76090 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms