Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ANOS2P-203ENST00000472227 1816 ntBASIC15.54■□□□□ 0.08
NDUFA1O15239 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA1O15239 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 GUSBP5-202ENST00000510805 1989 ntBASIC15.53■□□□□ 0.08
NDUFA1O15239 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.53■□□□□ 0.08
NDUFA1O15239 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFA1O15239 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.53■□□□□ 0.08
NDUFA1O15239 DUSP8P3-201ENST00000399571 1760 ntBASIC15.53■□□□□ 0.08
NDUFA1O15239 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NDUFA1O15239 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA1O15239 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA1O15239 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA1O15239 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
NDUFA1O15239 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA1O15239 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NDUFA1O15239 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA1O15239 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA1O15239 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA1O15239 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.52■□□□□ 0.08
NDUFA1O15239 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA1O15239 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.52■□□□□ 0.08
NDUFA1O15239 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.52■□□□□ 0.08
NDUFA1O15239 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
NDUFA1O15239 AC007029.1-201ENST00000604183 313 ntBASIC15.52■□□□□ 0.08
NDUFA1O15239 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA1O15239 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA1O15239 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
NDUFA1O15239 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA1O15239 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NDUFA1O15239 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
NDUFA1O15239 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA1O15239 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 ECEL1P1-201ENST00000373592 1742 ntBASIC15.51■□□□□ 0.07
NDUFA1O15239 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 C1orf229-201ENST00000623686 2258 ntBASIC15.51■□□□□ 0.07
NDUFA1O15239 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA1O15239 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA1O15239 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA1O15239 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.51■□□□□ 0.07
NDUFA1O15239 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NDUFA1O15239 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 AC092068.2-201ENST00000590491 1708 ntBASIC15.51■□□□□ 0.07
NDUFA1O15239 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDUFA1O15239 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA1O15239 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA1O15239 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA1O15239 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFA1O15239 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NDUFA1O15239 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA1O15239 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFA1O15239 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFA1O15239 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA1O15239 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA1O15239 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.49■□□□□ 0.07
NDUFA1O15239 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA1O15239 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA1O15239 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA1O15239 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFA1O15239 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA1O15239 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NDUFA1O15239 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms