Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PVT1-219ENST00000523427 938 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV13-1A0A0B4J241 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 RAP2CP1-202ENST00000605179 643 ntBASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV13-1A0A0B4J241 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV13-1A0A0B4J241 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-1A0A0B4J241 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 AC026202.3-201ENST00000600805 1127 ntBASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV13-1A0A0B4J241 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV13-1A0A0B4J241 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms