Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 MIR4281-201ENST00000580852 62 ntBASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV9A0A0B4J1U6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 AL161729.1-201ENST00000604104 1402 ntBASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRBV9A0A0B4J1U6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV9A0A0B4J1U6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRBV9A0A0B4J1U6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 AF131216.4-201ENST00000638924 1588 ntBASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV9A0A0B4J1U6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 AL031848.2-201ENST00000607670 837 ntBASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRBV9A0A0B4J1U6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV9A0A0B4J1U6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV9A0A0B4J1U6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRBV9A0A0B4J1U6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV9A0A0B4J1U6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV9A0A0B4J1U6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 AC004812.2-201ENST00000611079 2094 ntBASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV9A0A0B4J1U6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 AL022069.1-201ENST00000568025 1636 ntBASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV9A0A0B4J1U6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms