Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 AC103834.1-201ENST00000520383 144 ntBASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV1A0A0A0MS02 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.46■□□□□ 0.23
TRGV1A0A0A0MS02 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV1A0A0A0MS02 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRGV1A0A0A0MS02 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
TRGV1A0A0A0MS02 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.46■□□□□ 0.23
TRGV1A0A0A0MS02 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRGV1A0A0A0MS02 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 AC103724.3-201ENST00000564481 992 ntBASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 AL031848.2-201ENST00000607670 837 ntBASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV1A0A0A0MS02 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV1A0A0A0MS02 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 AC131274.2-201ENST00000580697 1507 ntBASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV1A0A0A0MS02 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 AF131216.4-201ENST00000638924 1588 ntBASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV1A0A0A0MS02 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV1A0A0A0MS02 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV1A0A0A0MS02 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.39■□□□□ 0.22
TRGV1A0A0A0MS02 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms