Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.53■■■□□ 2
PCDHAC2Q9Y5I4 AC104564.3-201ENST00000582367 638 ntBASIC27.53■■■□□ 2
PCDHAC2Q9Y5I4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.53■■■□□ 2
PCDHAC2Q9Y5I4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 AC008764.7-201ENST00000593779 1081 ntBASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 MIR6821-201ENST00000617625 74 ntBASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 DUSP8P4-201ENST00000399538 1761 ntBASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.52■■■□□ 2
PCDHAC2Q9Y5I4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.51■■□□□ 1.99
PCDHAC2Q9Y5I4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.51■■□□□ 1.99
PCDHAC2Q9Y5I4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHAC2Q9Y5I4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHAC2Q9Y5I4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHAC2Q9Y5I4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 RASA4CP-201ENST00000424092 1398 ntBASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
PCDHAC2Q9Y5I4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 C17orf82-201ENST00000623772 1530 ntBASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 AC091060.1-201ENST00000623524 1766 ntBASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
PCDHAC2Q9Y5I4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHAC2Q9Y5I4 AC097381.1-201ENST00000429019 1296 ntBASIC27.48■■□□□ 1.99
PCDHAC2Q9Y5I4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHAC2Q9Y5I4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHAC2Q9Y5I4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
PCDHAC2Q9Y5I4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHAC2Q9Y5I4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 AC099791.1-201ENST00000416440 715 ntBASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PCDHAC2Q9Y5I4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 AL022069.1-201ENST00000568025 1636 ntBASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 AC092171.4-201ENST00000609130 632 ntBASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHAC2Q9Y5I4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCDHAC2Q9Y5I4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.45■■□□□ 1.98
PCDHAC2Q9Y5I4 AC011298.3-201ENST00000615796 283 ntBASIC27.45■■□□□ 1.98
PCDHAC2Q9Y5I4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHAC2Q9Y5I4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHAC2Q9Y5I4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.45■■□□□ 1.98
PCDHAC2Q9Y5I4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 AL162430.1-201ENST00000480705 870 ntBASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 AC027682.1-201ENST00000562846 899 ntBASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
PCDHAC2Q9Y5I4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHAC2Q9Y5I4 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.42■■□□□ 1.98
PCDHAC2Q9Y5I4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.42■■□□□ 1.98
PCDHAC2Q9Y5I4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
PCDHAC2Q9Y5I4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
PCDHAC2Q9Y5I4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms