Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 EP400NL-214ENST00000641289 2402 ntBASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXJ3Q9UPW0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXJ3Q9UPW0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 ANOS2P-203ENST00000472227 1816 ntBASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXJ3Q9UPW0 AC090877.2-201ENST00000558441 1738 ntBASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 AC092068.2-201ENST00000590491 1708 ntBASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXJ3Q9UPW0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
FOXJ3Q9UPW0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
FOXJ3Q9UPW0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 LINC00565-201ENST00000562710 2331 ntBASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXJ3Q9UPW0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 NTF6A-201ENST00000591175 560 ntBASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXJ3Q9UPW0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 DUSP8P3-201ENST00000399571 1760 ntBASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
FOXJ3Q9UPW0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.86■□□□□ 0.77
FOXJ3Q9UPW0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms