Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
LRIT1Q9P2V4 AC024257.2-201ENST00000549699 147 ntBASIC22.21■■□□□ 1.15
LRIT1Q9P2V4 DUX4L19-201ENST00000557448 1267 ntBASIC22.21■■□□□ 1.15
LRIT1Q9P2V4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRIT1Q9P2V4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRIT1Q9P2V4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.2■■□□□ 1.14
LRIT1Q9P2V4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRIT1Q9P2V4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 AC092171.4-201ENST00000609130 632 ntBASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRIT1Q9P2V4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 EDA-201ENST00000338901 1233 ntBASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 SUDS3P1-201ENST00000505831 966 ntBASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 AL031432.3-201ENST00000607698 485 ntBASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 HLA-L-211ENST00000482052 1765 ntBASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRIT1Q9P2V4 SYT6-210ENST00000641643 1587 ntBASIC22.16■■□□□ 1.14
LRIT1Q9P2V4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRIT1Q9P2V4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRIT1Q9P2V4 AL355001.2-201ENST00000620617 1191 ntBASIC22.16■■□□□ 1.14
LRIT1Q9P2V4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRIT1Q9P2V4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 AC009102.2-201ENST00000606772 1639 ntBASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRIT1Q9P2V4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.14■■□□□ 1.14
LRIT1Q9P2V4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRIT1Q9P2V4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRIT1Q9P2V4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRIT1Q9P2V4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
LRIT1Q9P2V4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRIT1Q9P2V4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 AC099791.2-201ENST00000605725 427 ntBASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.13■■□□□ 1.13
LRIT1Q9P2V4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 ZNRF2P3-201ENST00000424200 374 ntBASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 AL161729.1-201ENST00000604104 1402 ntBASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.12■■□□□ 1.13
LRIT1Q9P2V4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms