Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMIM3Q9BZL3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 ANOS2P-203ENST00000472227 1816 ntBASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 AC137767.1-201ENST00000602918 1920 ntBASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 AC021231.2-201ENST00000594613 730 ntBASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM3Q9BZL3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 AC127496.7-201ENST00000625110 1798 ntBASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM3Q9BZL3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SMIM3Q9BZL3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM3Q9BZL3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 AC087741.3-201ENST00000624270 1347 ntBASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 AC148477.6-201ENST00000623746 465 ntBASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 AL137060.1-201ENST00000618151 2648 ntBASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM3Q9BZL3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM3Q9BZL3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
SMIM3Q9BZL3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 AC008813.1-201ENST00000536597 885 ntBASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
SMIM3Q9BZL3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms