Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.12■■■□□ 2.57
USP31Q70CQ4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.12■■■□□ 2.57
USP31Q70CQ4 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.12■■■□□ 2.57
USP31Q70CQ4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.12■■■□□ 2.57
USP31Q70CQ4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP31Q70CQ4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP31Q70CQ4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.12■■■□□ 2.57
USP31Q70CQ4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.11■■■□□ 2.57
USP31Q70CQ4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.11■■■□□ 2.57
USP31Q70CQ4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.11■■■□□ 2.57
USP31Q70CQ4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USP31Q70CQ4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USP31Q70CQ4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP31Q70CQ4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP31Q70CQ4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
USP31Q70CQ4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.1■■■□□ 2.57
USP31Q70CQ4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
USP31Q70CQ4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.09■■■□□ 2.57
USP31Q70CQ4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.09■■■□□ 2.57
USP31Q70CQ4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
USP31Q70CQ4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
USP31Q70CQ4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
USP31Q70CQ4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.09■■■□□ 2.57
USP31Q70CQ4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
USP31Q70CQ4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP31Q70CQ4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP31Q70CQ4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.08■■■□□ 2.57
USP31Q70CQ4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
USP31Q70CQ4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP31Q70CQ4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP31Q70CQ4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
USP31Q70CQ4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
USP31Q70CQ4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
USP31Q70CQ4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
USP31Q70CQ4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
USP31Q70CQ4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USP31Q70CQ4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.07■■■□□ 2.56
USP31Q70CQ4 AL161729.1-201ENST00000604104 1402 ntBASIC31.06■■■□□ 2.56
USP31Q70CQ4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
USP31Q70CQ4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP31Q70CQ4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP31Q70CQ4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP31Q70CQ4 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.05■■■□□ 2.56
USP31Q70CQ4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
USP31Q70CQ4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
USP31Q70CQ4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP31Q70CQ4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.05■■■□□ 2.56
USP31Q70CQ4 CA15P2-201ENST00000611168 834 ntBASIC31.05■■■□□ 2.56
USP31Q70CQ4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP31Q70CQ4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
USP31Q70CQ4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.04■■■□□ 2.56
USP31Q70CQ4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
USP31Q70CQ4 RASA4CP-201ENST00000424092 1398 ntBASIC31.04■■■□□ 2.56
USP31Q70CQ4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.04■■■□□ 2.56
USP31Q70CQ4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.04■■■□□ 2.56
USP31Q70CQ4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP31Q70CQ4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.04■■■□□ 2.56
USP31Q70CQ4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP31Q70CQ4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.04■■■□□ 2.56
USP31Q70CQ4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
USP31Q70CQ4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP31Q70CQ4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP31Q70CQ4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP31Q70CQ4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP31Q70CQ4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP31Q70CQ4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
USP31Q70CQ4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
USP31Q70CQ4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.03■■■□□ 2.56
USP31Q70CQ4 AC027682.1-201ENST00000562846 899 ntBASIC31.03■■■□□ 2.56
USP31Q70CQ4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP31Q70CQ4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.02■■■□□ 2.56
USP31Q70CQ4 AC136469.2-201ENST00000623944 1028 ntBASIC31.02■■■□□ 2.56
USP31Q70CQ4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
USP31Q70CQ4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.01■■■□□ 2.56
USP31Q70CQ4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
USP31Q70CQ4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP31Q70CQ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
USP31Q70CQ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP31Q70CQ4 AC241377.3-202ENST00000626088 1088 ntBASIC31.01■■■□□ 2.55
USP31Q70CQ4 AC241585.3-202ENST00000628937 1088 ntBASIC31.01■■■□□ 2.55
USP31Q70CQ4 AC245100.8-202ENST00000629247 1058 ntBASIC31.01■■■□□ 2.55
USP31Q70CQ4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP31Q70CQ4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USP31Q70CQ4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31■■■□□ 2.55
USP31Q70CQ4 AC006455.2-201ENST00000429931 906 ntBASIC31■■■□□ 2.55
USP31Q70CQ4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31■■■□□ 2.55
USP31Q70CQ4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31■■■□□ 2.55
USP31Q70CQ4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
USP31Q70CQ4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC30.99■■■□□ 2.55
USP31Q70CQ4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.99■■■□□ 2.55
USP31Q70CQ4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.98■■■□□ 2.55
USP31Q70CQ4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
USP31Q70CQ4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP31Q70CQ4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
USP31Q70CQ4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP31Q70CQ4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
USP31Q70CQ4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
USP31Q70CQ4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.97■■■□□ 2.55
USP31Q70CQ4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
USP31Q70CQ4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms