Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.31■□□□□ 0.84
CSNK1A1P48729 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.31■□□□□ 0.84
CSNK1A1P48729 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1A1P48729 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1A1P48729 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1A1P48729 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CSNK1A1P48729 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CSNK1A1P48729 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
CSNK1A1P48729 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1A1P48729 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1A1P48729 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1A1P48729 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.3■□□□□ 0.84
CSNK1A1P48729 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1A1P48729 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CSNK1A1P48729 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.3■□□□□ 0.84
CSNK1A1P48729 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1A1P48729 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1A1P48729 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSNK1A1P48729 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1A1P48729 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1A1P48729 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1A1P48729 AC004448.1-201ENST00000458332 883 ntBASIC20.29■□□□□ 0.84
CSNK1A1P48729 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1A1P48729 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1P48729 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1P48729 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1P48729 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CSNK1A1P48729 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1A1P48729 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1P48729 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.28■□□□□ 0.84
CSNK1A1P48729 AL451085.2-201ENST00000605085 799 ntBASIC20.28■□□□□ 0.84
CSNK1A1P48729 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CSNK1A1P48729 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1A1P48729 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1A1P48729 KRT125P-201ENST00000546827 989 ntBASIC20.27■□□□□ 0.84
CSNK1A1P48729 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1P48729 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1A1P48729 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CSNK1A1P48729 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1P48729 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1P48729 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1P48729 AC021242.3-201ENST00000607598 1377 ntBASIC20.26■□□□□ 0.83
CSNK1A1P48729 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 AC009299.2-201ENST00000482477 511 ntBASIC20.26■□□□□ 0.83
CSNK1A1P48729 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1P48729 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1P48729 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CSNK1A1P48729 ALDH1A3-203ENST00000557963 1670 ntBASIC20.26■□□□□ 0.83
CSNK1A1P48729 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1P48729 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1P48729 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1P48729 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 Z92544.1-202ENST00000571933 1220 ntBASIC20.25■□□□□ 0.83
CSNK1A1P48729 SNX5-217ENST00000606557 1087 ntBASIC20.25■□□□□ 0.83
CSNK1A1P48729 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1P48729 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1A1P48729 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1P48729 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1P48729 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.24■□□□□ 0.83
CSNK1A1P48729 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.24■□□□□ 0.83
CSNK1A1P48729 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1P48729 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1P48729 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1P48729 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1P48729 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1P48729 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1P48729 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1P48729 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms