Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
RXRBP28702 DET1-205ENST00000558413 583 ntTSL 4 BASIC30.8■■■□□ 2.52
RXRBP28702 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
RXRBP28702 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RXRBP28702 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
RXRBP28702 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RXRBP28702 AC016769.1-201ENST00000409132 1010 ntBASIC30.79■■■□□ 2.52
RXRBP28702 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RXRBP28702 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.79■■■□□ 2.52
RXRBP28702 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.79■■■□□ 2.52
RXRBP28702 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC30.79■■■□□ 2.52
RXRBP28702 PARP1-210ENST00000629232 477 ntTSL 5 BASIC30.79■■■□□ 2.52
RXRBP28702 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RXRBP28702 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.78■■■□□ 2.52
RXRBP28702 NCF1B-203ENST00000435988 1254 ntBASIC30.78■■■□□ 2.52
RXRBP28702 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RXRBP28702 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RXRBP28702 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.77■■■□□ 2.52
RXRBP28702 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RXRBP28702 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC30.77■■■□□ 2.52
RXRBP28702 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
RXRBP28702 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
RXRBP28702 CROCCP5-201ENST00000436658 830 ntBASIC30.77■■■□□ 2.52
RXRBP28702 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RXRBP28702 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
RXRBP28702 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
RXRBP28702 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
RXRBP28702 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
RXRBP28702 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.76■■■□□ 2.51
RXRBP28702 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
RXRBP28702 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RXRBP28702 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RXRBP28702 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.75■■■□□ 2.51
RXRBP28702 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RXRBP28702 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
RXRBP28702 C17orf82-201ENST00000623772 1530 ntBASIC30.75■■■□□ 2.51
RXRBP28702 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.75■■■□□ 2.51
RXRBP28702 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RXRBP28702 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.74■■■□□ 2.51
RXRBP28702 AC137761.2-201ENST00000561729 223 ntBASIC30.74■■■□□ 2.51
RXRBP28702 AC145350.3-201ENST00000569033 163 ntBASIC30.74■■■□□ 2.51
RXRBP28702 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RXRBP28702 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RXRBP28702 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC30.73■■■□□ 2.51
RXRBP28702 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.73■■■□□ 2.51
RXRBP28702 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.73■■■□□ 2.51
RXRBP28702 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
RXRBP28702 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RXRBP28702 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC30.72■■■□□ 2.51
RXRBP28702 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RXRBP28702 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.72■■■□□ 2.51
RXRBP28702 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
RXRBP28702 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC30.71■■■□□ 2.51
RXRBP28702 IGHV3-19-201ENST00000521488 291 ntBASIC30.71■■■□□ 2.51
RXRBP28702 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC30.71■■■□□ 2.51
RXRBP28702 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
RXRBP28702 AC009086.3-201ENST00000623486 1008 ntBASIC30.71■■■□□ 2.51
RXRBP28702 AC142472.1-201ENST00000612013 1741 ntBASIC30.7■■■□□ 2.51
RXRBP28702 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
RXRBP28702 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.7■■■□□ 2.51
RXRBP28702 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.7■■■□□ 2.51
RXRBP28702 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
RXRBP28702 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
RXRBP28702 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.69■■■□□ 2.5
RXRBP28702 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
RXRBP28702 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RXRBP28702 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
RXRBP28702 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RXRBP28702 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
RXRBP28702 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.69■■■□□ 2.5
RXRBP28702 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RXRBP28702 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
RXRBP28702 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RXRBP28702 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC30.68■■■□□ 2.5
RXRBP28702 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RXRBP28702 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RXRBP28702 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.68■■■□□ 2.5
RXRBP28702 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.68■■■□□ 2.5
RXRBP28702 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC30.68■■■□□ 2.5
RXRBP28702 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
RXRBP28702 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RXRBP28702 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
RXRBP28702 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RXRBP28702 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
RXRBP28702 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.66■■■□□ 2.5
RXRBP28702 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RXRBP28702 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC30.66■■■□□ 2.5
RXRBP28702 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
RXRBP28702 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RXRBP28702 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
RXRBP28702 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RXRBP28702 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RXRBP28702 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
RXRBP28702 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RXRBP28702 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.65■■■□□ 2.5
RXRBP28702 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RXRBP28702 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RXRBP28702 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RXRBP28702 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RXRBP28702 GPX1P1-201ENST00000388829 606 ntBASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms