Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PRAF2O60831 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAF2O60831 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAF2O60831 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
PRAF2O60831 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAF2O60831 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAF2O60831 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PRAF2O60831 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PRAF2O60831 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAF2O60831 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAF2O60831 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PRAF2O60831 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAF2O60831 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAF2O60831 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAF2O60831 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRAF2O60831 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAF2O60831 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRAF2O60831 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRAF2O60831 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAF2O60831 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAF2O60831 AC136428.2-201ENST00000563187 214 ntBASIC19.31■□□□□ 0.68
PRAF2O60831 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAF2O60831 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAF2O60831 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRAF2O60831 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAF2O60831 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAF2O60831 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAF2O60831 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 AL359258.2-201ENST00000564063 1566 ntBASIC19.3■□□□□ 0.68
PRAF2O60831 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAF2O60831 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAF2O60831 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAF2O60831 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAF2O60831 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.29■□□□□ 0.68
PRAF2O60831 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.29■□□□□ 0.68
PRAF2O60831 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAF2O60831 ESRRAP2-201ENST00000418437 1549 ntBASIC19.29■□□□□ 0.68
PRAF2O60831 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAF2O60831 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAF2O60831 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAF2O60831 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAF2O60831 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.28■□□□□ 0.68
PRAF2O60831 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAF2O60831 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRAF2O60831 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAF2O60831 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAF2O60831 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAF2O60831 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAF2O60831 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.27■□□□□ 0.68
PRAF2O60831 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAF2O60831 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAF2O60831 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAF2O60831 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRAF2O60831 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.27■□□□□ 0.67
PRAF2O60831 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRAF2O60831 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PRAF2O60831 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRAF2O60831 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.26■□□□□ 0.67
PRAF2O60831 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRAF2O60831 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAF2O60831 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms