Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE3A6NKU9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.16■■□□□ 1.78
SPDYE3A6NKU9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.16■■□□□ 1.78
SPDYE3A6NKU9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.16■■□□□ 1.78
SPDYE3A6NKU9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.16■■□□□ 1.78
SPDYE3A6NKU9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.16■■□□□ 1.78
SPDYE3A6NKU9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE3A6NKU9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 AC008406.3-201ENST00000620001 1374 ntBASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE3A6NKU9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE3A6NKU9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.14■■□□□ 1.78
SPDYE3A6NKU9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.14■■□□□ 1.78
SPDYE3A6NKU9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE3A6NKU9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.14■■□□□ 1.77
SPDYE3A6NKU9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.14■■□□□ 1.77
SPDYE3A6NKU9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SPDYE3A6NKU9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE3A6NKU9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
SPDYE3A6NKU9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE3A6NKU9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 AC131281.2-201ENST00000520478 145 ntBASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SPDYE3A6NKU9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.1■■□□□ 1.77
SPDYE3A6NKU9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.1■■□□□ 1.77
SPDYE3A6NKU9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE3A6NKU9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SPDYE3A6NKU9 LINC01124-201ENST00000409786 2117 ntBASIC26.08■■□□□ 1.76
SPDYE3A6NKU9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 AL139125.2-201ENST00000623134 1869 ntBASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE3A6NKU9 ALDH1A3-203ENST00000557963 1670 ntBASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPDYE3A6NKU9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
SPDYE3A6NKU9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.05■■□□□ 1.76
SPDYE3A6NKU9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.05■■□□□ 1.76
SPDYE3A6NKU9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.05■■□□□ 1.76
SPDYE3A6NKU9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SPDYE3A6NKU9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPDYE3A6NKU9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SPDYE3A6NKU9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SPDYE3A6NKU9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SPDYE3A6NKU9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SPDYE3A6NKU9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
SPDYE3A6NKU9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SPDYE3A6NKU9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms