Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 AC103834.1-201ENST00000520383 144 ntBASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 AC103724.3-201ENST00000564481 992 ntBASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00474Q9P2X8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00474Q9P2X8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00474Q9P2X8 AC133561.1-201ENST00000568600 2415 ntBASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 BX664725.1-201ENST00000438252 379 ntBASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00474Q9P2X8 AC141586.4-201ENST00000624558 1573 ntBASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 KRT125P-201ENST00000546827 989 ntBASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 Z92544.1-202ENST00000571933 1220 ntBASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 MIR4281-201ENST00000580852 62 ntBASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00474Q9P2X8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00474Q9P2X8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 RARRES2P1-201ENST00000474487 481 ntBASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 AC137630.3-201ENST00000607245 391 ntBASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 AL022069.1-201ENST00000568025 1636 ntBASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 AC138932.3-201ENST00000567634 1902 ntBASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00474Q9P2X8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms