Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHCHD1Q96BP2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHCHD1Q96BP2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHCHD1Q96BP2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHCHD1Q96BP2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.78■□□□□ 0.28
CHCHD1Q96BP2 ANOS2P-203ENST00000472227 1816 ntBASIC16.77■□□□□ 0.28
CHCHD1Q96BP2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.77■□□□□ 0.28
CHCHD1Q96BP2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHCHD1Q96BP2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHCHD1Q96BP2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHCHD1Q96BP2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHCHD1Q96BP2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHCHD1Q96BP2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CHCHD1Q96BP2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHCHD1Q96BP2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHCHD1Q96BP2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 AC092068.2-201ENST00000590491 1708 ntBASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 AC242852.2-201ENST00000615738 1807 ntBASIC16.75■□□□□ 0.27
CHCHD1Q96BP2 AL391121.1-201ENST00000607967 1349 ntBASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHCHD1Q96BP2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.73■□□□□ 0.27
CHCHD1Q96BP2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 HLA-L-211ENST00000482052 1765 ntBASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHCHD1Q96BP2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHCHD1Q96BP2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHCHD1Q96BP2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms