Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.13■□□□□ 0.33
CMC4P56277 AC010997.5-201ENST00000609182 354 ntBASIC17.13■□□□□ 0.33
CMC4P56277 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.13■□□□□ 0.33
CMC4P56277 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMC4P56277 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.13■□□□□ 0.33
CMC4P56277 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.13■□□□□ 0.33
CMC4P56277 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.13■□□□□ 0.33
CMC4P56277 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.12■□□□□ 0.33
CMC4P56277 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.12■□□□□ 0.33
CMC4P56277 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 GUSBP5-201ENST00000418136 578 ntBASIC17.12■□□□□ 0.33
CMC4P56277 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.12■□□□□ 0.33
CMC4P56277 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.12■□□□□ 0.33
CMC4P56277 SNX5-217ENST00000606557 1087 ntBASIC17.12■□□□□ 0.33
CMC4P56277 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CMC4P56277 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.12■□□□□ 0.33
CMC4P56277 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMC4P56277 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.11■□□□□ 0.33
CMC4P56277 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CMC4P56277 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.11■□□□□ 0.33
CMC4P56277 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.11■□□□□ 0.33
CMC4P56277 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.11■□□□□ 0.33
CMC4P56277 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CMC4P56277 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMC4P56277 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMC4P56277 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMC4P56277 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.1■□□□□ 0.33
CMC4P56277 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMC4P56277 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.1■□□□□ 0.33
CMC4P56277 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CMC4P56277 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.1■□□□□ 0.33
CMC4P56277 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMC4P56277 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.1■□□□□ 0.33
CMC4P56277 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMC4P56277 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMC4P56277 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
CMC4P56277 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMC4P56277 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CMC4P56277 KRT16P3-201ENST00000439127 1283 ntBASIC17.09■□□□□ 0.33
CMC4P56277 TSPY9P-201ENST00000440215 945 ntBASIC17.09■□□□□ 0.33
CMC4P56277 TSPY11P-201ENST00000442607 1045 ntBASIC17.09■□□□□ 0.33
CMC4P56277 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMC4P56277 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.09■□□□□ 0.33
CMC4P56277 AC131274.2-201ENST00000580697 1507 ntBASIC17.09■□□□□ 0.33
CMC4P56277 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.09■□□□□ 0.33
CMC4P56277 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMC4P56277 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMC4P56277 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMC4P56277 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMC4P56277 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.08■□□□□ 0.32
CMC4P56277 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.08■□□□□ 0.32
CMC4P56277 AC005703.6-201ENST00000623265 1329 ntBASIC17.08■□□□□ 0.32
CMC4P56277 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 MIR6724-1-201ENST00000616420 92 ntBASIC17.08■□□□□ 0.32
CMC4P56277 MIR6724-2-201ENST00000616483 92 ntBASIC17.08■□□□□ 0.32
CMC4P56277 MIR6724-4-201ENST00000617390 92 ntBASIC17.08■□□□□ 0.32
CMC4P56277 MIR6724-3-201ENST00000622482 92 ntBASIC17.08■□□□□ 0.32
CMC4P56277 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMC4P56277 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CMC4P56277 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CMC4P56277 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.07■□□□□ 0.32
CMC4P56277 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.07■□□□□ 0.32
CMC4P56277 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CMC4P56277 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.07■□□□□ 0.32
CMC4P56277 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CMC4P56277 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMC4P56277 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.07■□□□□ 0.32
CMC4P56277 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMC4P56277 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CMC4P56277 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CMC4P56277 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.06■□□□□ 0.32
CMC4P56277 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMC4P56277 LINC00543-201ENST00000567234 1845 ntBASIC17.06■□□□□ 0.32
CMC4P56277 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms