Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HMGCS2P54868 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HMGCS2P54868 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HMGCS2P54868 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
HMGCS2P54868 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.84■■□□□ 1.89
HMGCS2P54868 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
HMGCS2P54868 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
HMGCS2P54868 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
HMGCS2P54868 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.83■■□□□ 1.89
HMGCS2P54868 MIR4767-201ENST00000582827 78 ntBASIC26.83■■□□□ 1.89
HMGCS2P54868 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HMGCS2P54868 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
HMGCS2P54868 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
HMGCS2P54868 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.83■■□□□ 1.88
HMGCS2P54868 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
HMGCS2P54868 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
HMGCS2P54868 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
HMGCS2P54868 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.82■■□□□ 1.88
HMGCS2P54868 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HMGCS2P54868 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.82■■□□□ 1.88
HMGCS2P54868 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.82■■□□□ 1.88
HMGCS2P54868 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HMGCS2P54868 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HMGCS2P54868 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HMGCS2P54868 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HMGCS2P54868 SERBP1P1-201ENST00000396021 1160 ntBASIC26.81■■□□□ 1.88
HMGCS2P54868 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.81■■□□□ 1.88
HMGCS2P54868 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.81■■□□□ 1.88
HMGCS2P54868 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HMGCS2P54868 AC099791.2-201ENST00000605725 427 ntBASIC26.81■■□□□ 1.88
HMGCS2P54868 AC092171.4-201ENST00000609130 632 ntBASIC26.81■■□□□ 1.88
HMGCS2P54868 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.81■■□□□ 1.88
HMGCS2P54868 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.81■■□□□ 1.88
HMGCS2P54868 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.81■■□□□ 1.88
HMGCS2P54868 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HMGCS2P54868 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCS2P54868 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCS2P54868 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
HMGCS2P54868 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
HMGCS2P54868 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
HMGCS2P54868 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.79■■□□□ 1.88
HMGCS2P54868 AC091305.1-201ENST00000479476 895 ntBASIC26.79■■□□□ 1.88
HMGCS2P54868 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.79■■□□□ 1.88
HMGCS2P54868 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
HMGCS2P54868 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
HMGCS2P54868 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
HMGCS2P54868 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.78■■□□□ 1.88
HMGCS2P54868 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.78■■□□□ 1.88
HMGCS2P54868 MIR5787-201ENST00000611784 55 ntBASIC26.78■■□□□ 1.88
HMGCS2P54868 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.78■■□□□ 1.88
HMGCS2P54868 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HMGCS2P54868 AC009102.2-201ENST00000606772 1639 ntBASIC26.77■■□□□ 1.88
HMGCS2P54868 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.77■■□□□ 1.88
HMGCS2P54868 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HMGCS2P54868 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.77■■□□□ 1.88
HMGCS2P54868 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.77■■□□□ 1.88
HMGCS2P54868 MIR6089-201ENST00000616698 64 ntBASIC26.77■■□□□ 1.88
HMGCS2P54868 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
HMGCS2P54868 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.76■■□□□ 1.87
HMGCS2P54868 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.76■■□□□ 1.87
HMGCS2P54868 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.76■■□□□ 1.87
HMGCS2P54868 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.76■■□□□ 1.87
HMGCS2P54868 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
HMGCS2P54868 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.76■■□□□ 1.87
HMGCS2P54868 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
HMGCS2P54868 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.75■■□□□ 1.87
HMGCS2P54868 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.75■■□□□ 1.87
HMGCS2P54868 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCS2P54868 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCS2P54868 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCS2P54868 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCS2P54868 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCS2P54868 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCS2P54868 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
HMGCS2P54868 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.74■■□□□ 1.87
HMGCS2P54868 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCS2P54868 AL022069.1-201ENST00000568025 1636 ntBASIC26.73■■□□□ 1.87
HMGCS2P54868 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
HMGCS2P54868 CA15P2-201ENST00000611168 834 ntBASIC26.73■■□□□ 1.87
HMGCS2P54868 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HMGCS2P54868 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.72■■□□□ 1.87
HMGCS2P54868 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.72■■□□□ 1.87
HMGCS2P54868 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HMGCS2P54868 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.72■■□□□ 1.87
HMGCS2P54868 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
HMGCS2P54868 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HMGCS2P54868 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.71■■□□□ 1.87
HMGCS2P54868 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HMGCS2P54868 RASA4CP-201ENST00000424092 1398 ntBASIC26.71■■□□□ 1.87
HMGCS2P54868 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.71■■□□□ 1.87
HMGCS2P54868 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
HMGCS2P54868 AC104564.3-201ENST00000582367 638 ntBASIC26.7■■□□□ 1.86
HMGCS2P54868 AC011298.3-201ENST00000615796 283 ntBASIC26.7■■□□□ 1.86
HMGCS2P54868 DUSP8P4-201ENST00000399538 1761 ntBASIC26.7■■□□□ 1.86
HMGCS2P54868 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
HMGCS2P54868 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCS2P54868 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCS2P54868 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCS2P54868 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCS2P54868 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms