Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 MIR4281-201ENST00000580852 62 ntBASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TRBV23-1A0A0A0MS06 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV23-1A0A0A0MS06 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.27■□□□□ 0.67
TRBV23-1A0A0A0MS06 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV23-1A0A0A0MS06 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV23-1A0A0A0MS06 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV23-1A0A0A0MS06 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV23-1A0A0A0MS06 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV23-1A0A0A0MS06 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV23-1A0A0A0MS06 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRBV23-1A0A0A0MS06 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 BX664725.1-201ENST00000438252 379 ntBASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 AL451085.2-201ENST00000605085 799 ntBASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 AC137630.3-201ENST00000607245 391 ntBASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 AC138932.3-201ENST00000567634 1902 ntBASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRBV23-1A0A0A0MS06 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 Z92544.1-202ENST00000571933 1220 ntBASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV23-1A0A0A0MS06 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 AC009299.2-201ENST00000482477 511 ntBASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV23-1A0A0A0MS06 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms