Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RCL1Q9Y2P8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 PKD1P6-201ENST00000343738 4769 ntBASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCL1Q9Y2P8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCL1Q9Y2P8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 AC126177.7-201ENST00000547904 679 ntBASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCL1Q9Y2P8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCL1Q9Y2P8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RCL1Q9Y2P8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RCL1Q9Y2P8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RCL1Q9Y2P8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCL1Q9Y2P8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCL1Q9Y2P8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.77■□□□□ 0.59
RCL1Q9Y2P8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RCL1Q9Y2P8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCL1Q9Y2P8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RCL1Q9Y2P8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 DUX4L11-201ENST00000611504 1267 ntBASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 DUX4L12-201ENST00000614593 1267 ntBASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 DUX4L14-201ENST00000621227 1267 ntBASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms