Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HES6-206ENST00000409574 738 ntTSL 2 BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC37.84■■■■□ 3.65
RIMBP3Q9UFD9 AC026185.1-201ENST00000445748 174 ntBASIC37.83■■■■□ 3.65
RIMBP3Q9UFD9 AL358852.1-201ENST00000623174 1268 ntBASIC37.83■■■■□ 3.65
RIMBP3Q9UFD9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC37.83■■■■□ 3.65
RIMBP3Q9UFD9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
RIMBP3Q9UFD9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC37.83■■■■□ 3.65
RIMBP3Q9UFD9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC37.82■■■■□ 3.65
RIMBP3Q9UFD9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
RIMBP3Q9UFD9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC37.82■■■■□ 3.65
RIMBP3Q9UFD9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC37.82■■■■□ 3.65
RIMBP3Q9UFD9 AC006015.1-201ENST00000429970 570 ntBASIC37.82■■■■□ 3.64
RIMBP3Q9UFD9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC37.82■■■■□ 3.64
RIMBP3Q9UFD9 AC012414.1-201ENST00000556676 535 ntBASIC37.82■■■■□ 3.64
RIMBP3Q9UFD9 MIR6084-201ENST00000622012 110 ntBASIC37.82■■■■□ 3.64
RIMBP3Q9UFD9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC37.82■■■■□ 3.64
RIMBP3Q9UFD9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
RIMBP3Q9UFD9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC37.81■■■■□ 3.64
RIMBP3Q9UFD9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC37.81■■■■□ 3.64
RIMBP3Q9UFD9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC37.81■■■■□ 3.64
RIMBP3Q9UFD9 TERF1P2-201ENST00000583350 1212 ntBASIC37.81■■■■□ 3.64
RIMBP3Q9UFD9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
RIMBP3Q9UFD9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC37.81■■■■□ 3.64
RIMBP3Q9UFD9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC37.8■■■■□ 3.64
RIMBP3Q9UFD9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
RIMBP3Q9UFD9 AL109923.1-201ENST00000618799 583 ntBASIC37.8■■■■□ 3.64
RIMBP3Q9UFD9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC37.8■■■■□ 3.64
RIMBP3Q9UFD9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC37.8■■■■□ 3.64
RIMBP3Q9UFD9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 DET1-205ENST00000558413 583 ntTSL 4 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC37.79■■■■□ 3.64
RIMBP3Q9UFD9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
RIMBP3Q9UFD9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
RIMBP3Q9UFD9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
RIMBP3Q9UFD9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
RIMBP3Q9UFD9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC37.78■■■■□ 3.64
RIMBP3Q9UFD9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC37.78■■■■□ 3.64
RIMBP3Q9UFD9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC37.77■■■■□ 3.64
RIMBP3Q9UFD9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC37.77■■■■□ 3.64
RIMBP3Q9UFD9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC37.77■■■■□ 3.64
RIMBP3Q9UFD9 TSPY26P-201ENST00000476365 1326 ntBASIC37.77■■■■□ 3.64
RIMBP3Q9UFD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC37.76■■■■□ 3.64
RIMBP3Q9UFD9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC37.76■■■■□ 3.63
RIMBP3Q9UFD9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
RIMBP3Q9UFD9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC37.76■■■■□ 3.63
RIMBP3Q9UFD9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC37.76■■■■□ 3.63
RIMBP3Q9UFD9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 LBH-205ENST00000407930 756 ntTSL 2 BASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 AC005703.6-201ENST00000623265 1329 ntBASIC37.74■■■■□ 3.63
RIMBP3Q9UFD9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC37.73■■■■□ 3.63
RIMBP3Q9UFD9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
RIMBP3Q9UFD9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
RIMBP3Q9UFD9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC37.72■■■■□ 3.63
RIMBP3Q9UFD9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC37.72■■■■□ 3.63
RIMBP3Q9UFD9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC37.72■■■■□ 3.63
RIMBP3Q9UFD9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
RIMBP3Q9UFD9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC37.7■■■■□ 3.63
RIMBP3Q9UFD9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC37.7■■■■□ 3.63
RIMBP3Q9UFD9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
RIMBP3Q9UFD9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC37.7■■■■□ 3.63
RIMBP3Q9UFD9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 CROCCP5-201ENST00000436658 830 ntBASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
RIMBP3Q9UFD9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC37.68■■■■□ 3.62
RIMBP3Q9UFD9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC37.68■■■■□ 3.62
RIMBP3Q9UFD9 KRT18P61-201ENST00000585825 1298 ntBASIC37.68■■■■□ 3.62
RIMBP3Q9UFD9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC37.68■■■■□ 3.62
RIMBP3Q9UFD9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC37.67■■■■□ 3.62
RIMBP3Q9UFD9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC37.67■■■■□ 3.62
RIMBP3Q9UFD9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC37.67■■■■□ 3.62
RIMBP3Q9UFD9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC37.67■■■■□ 3.62
RIMBP3Q9UFD9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC37.67■■■■□ 3.62
RIMBP3Q9UFD9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
RIMBP3Q9UFD9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
RIMBP3Q9UFD9 APTR-205ENST00000447009 902 ntTSL 2 BASIC37.66■■■■□ 3.62
RIMBP3Q9UFD9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
RIMBP3Q9UFD9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC37.65■■■■□ 3.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms