Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.63■■□□□ 1.53
NSUN3Q9H649 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.62■■□□□ 1.53
NSUN3Q9H649 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NSUN3Q9H649 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NSUN3Q9H649 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.62■■□□□ 1.53
NSUN3Q9H649 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.62■■□□□ 1.53
NSUN3Q9H649 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.62■■□□□ 1.53
NSUN3Q9H649 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
NSUN3Q9H649 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.62■■□□□ 1.53
NSUN3Q9H649 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NSUN3Q9H649 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NSUN3Q9H649 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.61■■□□□ 1.53
NSUN3Q9H649 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
NSUN3Q9H649 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NSUN3Q9H649 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.61■■□□□ 1.53
NSUN3Q9H649 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.6■■□□□ 1.53
NSUN3Q9H649 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NSUN3Q9H649 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.6■■□□□ 1.53
NSUN3Q9H649 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.6■■□□□ 1.53
NSUN3Q9H649 AC008764.7-201ENST00000593779 1081 ntBASIC24.6■■□□□ 1.53
NSUN3Q9H649 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NSUN3Q9H649 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NSUN3Q9H649 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
NSUN3Q9H649 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.59■■□□□ 1.53
NSUN3Q9H649 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.59■■□□□ 1.53
NSUN3Q9H649 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.59■■□□□ 1.53
NSUN3Q9H649 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.59■■□□□ 1.53
NSUN3Q9H649 AL138724.1-201ENST00000606771 1088 ntBASIC24.59■■□□□ 1.53
NSUN3Q9H649 AC011298.3-201ENST00000615796 283 ntBASIC24.59■■□□□ 1.53
NSUN3Q9H649 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.59■■□□□ 1.53
NSUN3Q9H649 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.59■■□□□ 1.53
NSUN3Q9H649 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NSUN3Q9H649 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NSUN3Q9H649 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
NSUN3Q9H649 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.58■■□□□ 1.53
NSUN3Q9H649 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NSUN3Q9H649 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
NSUN3Q9H649 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NSUN3Q9H649 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NSUN3Q9H649 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.58■■□□□ 1.53
NSUN3Q9H649 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.58■■□□□ 1.53
NSUN3Q9H649 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.58■■□□□ 1.53
NSUN3Q9H649 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NSUN3Q9H649 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.57■■□□□ 1.52
NSUN3Q9H649 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NSUN3Q9H649 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
NSUN3Q9H649 AC099791.1-201ENST00000416440 715 ntBASIC24.57■■□□□ 1.52
NSUN3Q9H649 AC090192.1-201ENST00000517740 490 ntBASIC24.57■■□□□ 1.52
NSUN3Q9H649 RARRES2P11-201ENST00000635158 484 ntBASIC24.57■■□□□ 1.52
NSUN3Q9H649 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
NSUN3Q9H649 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.56■■□□□ 1.52
NSUN3Q9H649 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.56■■□□□ 1.52
NSUN3Q9H649 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.56■■□□□ 1.52
NSUN3Q9H649 AC099791.2-201ENST00000605725 427 ntBASIC24.56■■□□□ 1.52
NSUN3Q9H649 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NSUN3Q9H649 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NSUN3Q9H649 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
NSUN3Q9H649 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NSUN3Q9H649 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
NSUN3Q9H649 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NSUN3Q9H649 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.55■■□□□ 1.52
NSUN3Q9H649 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NSUN3Q9H649 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NSUN3Q9H649 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NSUN3Q9H649 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
NSUN3Q9H649 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
NSUN3Q9H649 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.54■■□□□ 1.52
NSUN3Q9H649 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NSUN3Q9H649 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.54■■□□□ 1.52
NSUN3Q9H649 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.53■■□□□ 1.52
NSUN3Q9H649 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.53■■□□□ 1.52
NSUN3Q9H649 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
NSUN3Q9H649 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
NSUN3Q9H649 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.53■■□□□ 1.52
NSUN3Q9H649 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.53■■□□□ 1.52
NSUN3Q9H649 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
NSUN3Q9H649 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NSUN3Q9H649 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NSUN3Q9H649 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.52■■□□□ 1.52
NSUN3Q9H649 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NSUN3Q9H649 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.52■■□□□ 1.52
NSUN3Q9H649 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NSUN3Q9H649 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.52■■□□□ 1.52
NSUN3Q9H649 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.52■■□□□ 1.52
NSUN3Q9H649 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms