Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM2Q9C040 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM2Q9C040 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM2Q9C040 AC019171.1-201ENST00000601251 1056 ntBASIC21.17■□□□□ 0.98
TRIM2Q9C040 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM2Q9C040 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM2Q9C040 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM2Q9C040 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM2Q9C040 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM2Q9C040 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM2Q9C040 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM2Q9C040 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM2Q9C040 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
TRIM2Q9C040 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM2Q9C040 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRIM2Q9C040 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM2Q9C040 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 AC022616.5-201ENST00000518796 181 ntBASIC21.15■□□□□ 0.98
TRIM2Q9C040 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM2Q9C040 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM2Q9C040 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM2Q9C040 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TRIM2Q9C040 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM2Q9C040 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
TRIM2Q9C040 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM2Q9C040 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM2Q9C040 AC011551.1-201ENST00000614101 683 ntBASIC21.14■□□□□ 0.97
TRIM2Q9C040 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM2Q9C040 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM2Q9C040 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM2Q9C040 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM2Q9C040 RARRES2P1-201ENST00000474487 481 ntBASIC21.13■□□□□ 0.97
TRIM2Q9C040 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM2Q9C040 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM2Q9C040 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM2Q9C040 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM2Q9C040 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM2Q9C040 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 AL161729.1-201ENST00000604104 1402 ntBASIC21.12■□□□□ 0.97
TRIM2Q9C040 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
TRIM2Q9C040 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM2Q9C040 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM2Q9C040 ABCB10P4-201ENST00000566803 2184 ntBASIC21.11■□□□□ 0.97
TRIM2Q9C040 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM2Q9C040 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
TRIM2Q9C040 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM2Q9C040 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM2Q9C040 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRIM2Q9C040 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM2Q9C040 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM2Q9C040 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRIM2Q9C040 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM2Q9C040 BHLHE23-202ENST00000612929 1109 ntBASIC21.1■□□□□ 0.97
TRIM2Q9C040 AC074183.2-201ENST00000623112 922 ntBASIC21.1■□□□□ 0.97
TRIM2Q9C040 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRIM2Q9C040 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM2Q9C040 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TRIM2Q9C040 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM2Q9C040 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM2Q9C040 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM2Q9C040 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM2Q9C040 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM2Q9C040 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM2Q9C040 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM2Q9C040 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM2Q9C040 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM2Q9C040 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM2Q9C040 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM2Q9C040 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM2Q9C040 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
TRIM2Q9C040 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM2Q9C040 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM2Q9C040 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM2Q9C040 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM2Q9C040 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM2Q9C040 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM2Q9C040 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM2Q9C040 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
TRIM2Q9C040 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms