Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRRC3BQ96PB8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRRC3BQ96PB8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.92■■□□□ 1.42
LRRC3BQ96PB8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC3BQ96PB8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC3BQ96PB8 AC024257.2-201ENST00000549699 147 ntBASIC23.91■■□□□ 1.42
LRRC3BQ96PB8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC3BQ96PB8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC3BQ96PB8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC3BQ96PB8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 AC142381.2-201ENST00000566120 298 ntBASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC3BQ96PB8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRC3BQ96PB8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRC3BQ96PB8 AC135279.3-201ENST00000610945 1311 ntBASIC23.89■■□□□ 1.42
LRRC3BQ96PB8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.42
LRRC3BQ96PB8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LRRC3BQ96PB8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.89■■□□□ 1.41
LRRC3BQ96PB8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.89■■□□□ 1.41
LRRC3BQ96PB8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC3BQ96PB8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
LRRC3BQ96PB8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC3BQ96PB8 AC005703.6-201ENST00000623265 1329 ntBASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC3BQ96PB8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
LRRC3BQ96PB8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 DUSP8P4-201ENST00000399538 1761 ntBASIC23.85■■□□□ 1.41
LRRC3BQ96PB8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.84■■□□□ 1.41
LRRC3BQ96PB8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRC3BQ96PB8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.83■■□□□ 1.41
LRRC3BQ96PB8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRC3BQ96PB8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRC3BQ96PB8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.83■■□□□ 1.4
LRRC3BQ96PB8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LRRC3BQ96PB8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 EDA-201ENST00000338901 1233 ntBASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 AL355001.2-201ENST00000620617 1191 ntBASIC23.82■■□□□ 1.4
LRRC3BQ96PB8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 AL136967.2-201ENST00000623968 743 ntBASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC3BQ96PB8 AC091060.1-201ENST00000623524 1766 ntBASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC3BQ96PB8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms