Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.65■■□□□ 1.22
PDLIM5Q96HC4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM5Q96HC4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.64■■□□□ 1.21
PDLIM5Q96HC4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.64■■□□□ 1.21
PDLIM5Q96HC4 AC010980.1-201ENST00000587192 1142 ntBASIC22.64■■□□□ 1.21
PDLIM5Q96HC4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM5Q96HC4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.64■■□□□ 1.21
PDLIM5Q96HC4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 AC120024.1-201ENST00000562672 995 ntBASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM5Q96HC4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 MIR4508-201ENST00000584178 70 ntBASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM5Q96HC4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 AL033527.3-201ENST00000566366 1196 ntBASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM5Q96HC4 AL022069.1-201ENST00000568025 1636 ntBASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM5Q96HC4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM5Q96HC4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM5Q96HC4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.59■■□□□ 1.21
PDLIM5Q96HC4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.59■■□□□ 1.21
PDLIM5Q96HC4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.59■■□□□ 1.21
PDLIM5Q96HC4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.59■■□□□ 1.21
PDLIM5Q96HC4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM5Q96HC4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDLIM5Q96HC4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.58■■□□□ 1.2
PDLIM5Q96HC4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDLIM5Q96HC4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.58■■□□□ 1.2
PDLIM5Q96HC4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDLIM5Q96HC4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.58■■□□□ 1.2
PDLIM5Q96HC4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM5Q96HC4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM5Q96HC4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.57■■□□□ 1.2
PDLIM5Q96HC4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.57■■□□□ 1.2
PDLIM5Q96HC4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.57■■□□□ 1.2
PDLIM5Q96HC4 AC131274.2-201ENST00000580697 1507 ntBASIC22.57■■□□□ 1.2
PDLIM5Q96HC4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 THA1P-201ENST00000590384 1145 ntBASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM5Q96HC4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM5Q96HC4 AC103834.1-201ENST00000520383 144 ntBASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms