Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 MIR4281-201ENST00000580852 62 ntBASIC19.66■□□□□ 0.74
RAB39BQ96DA2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 AC133561.1-201ENST00000568600 2415 ntBASIC19.66■□□□□ 0.74
RAB39BQ96DA2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 AC097639.1-201ENST00000565519 1891 ntBASIC19.65■□□□□ 0.74
RAB39BQ96DA2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RAB39BQ96DA2 AC096887.2-201ENST00000623443 1957 ntBASIC19.64■□□□□ 0.74
RAB39BQ96DA2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB39BQ96DA2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB39BQ96DA2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
RAB39BQ96DA2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB39BQ96DA2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.63■□□□□ 0.73
RAB39BQ96DA2 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB39BQ96DA2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 AC021242.3-201ENST00000607598 1377 ntBASIC19.62■□□□□ 0.73
RAB39BQ96DA2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 KRT16P3-201ENST00000439127 1283 ntBASIC19.62■□□□□ 0.73
RAB39BQ96DA2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB39BQ96DA2 FOXO3B-201ENST00000395675 1928 ntBASIC19.62■□□□□ 0.73
RAB39BQ96DA2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB39BQ96DA2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB39BQ96DA2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 TSPY9P-201ENST00000440215 945 ntBASIC19.59■□□□□ 0.73
RAB39BQ96DA2 TSPY11P-201ENST00000442607 1045 ntBASIC19.59■□□□□ 0.73
RAB39BQ96DA2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB39BQ96DA2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAB39BQ96DA2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB39BQ96DA2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB39BQ96DA2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB39BQ96DA2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB39BQ96DA2 AC092028.1-203ENST00000608262 953 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms