Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF7Q8N684 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF7Q8N684 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CPSF7Q8N684 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CPSF7Q8N684 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CPSF7Q8N684 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.52■■□□□ 1.2
CPSF7Q8N684 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CPSF7Q8N684 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF7Q8N684 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CPSF7Q8N684 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CPSF7Q8N684 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF7Q8N684 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF7Q8N684 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.51■■□□□ 1.19
CPSF7Q8N684 AC093536.1-201ENST00000569153 554 ntBASIC22.51■■□□□ 1.19
CPSF7Q8N684 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF7Q8N684 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF7Q8N684 C9orf163-202ENST00000624034 2573 ntBASIC22.51■■□□□ 1.19
CPSF7Q8N684 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF7Q8N684 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF7Q8N684 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF7Q8N684 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.5■■□□□ 1.19
CPSF7Q8N684 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CPSF7Q8N684 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF7Q8N684 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CPSF7Q8N684 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CPSF7Q8N684 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF7Q8N684 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CPSF7Q8N684 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.49■■□□□ 1.19
CPSF7Q8N684 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 DUX4L18-201ENST00000553347 1267 ntBASIC22.49■■□□□ 1.19
CPSF7Q8N684 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.49■■□□□ 1.19
CPSF7Q8N684 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CPSF7Q8N684 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
CPSF7Q8N684 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPSF7Q8N684 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.48■■□□□ 1.19
CPSF7Q8N684 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPSF7Q8N684 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.48■■□□□ 1.19
CPSF7Q8N684 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 MIR3960-201ENST00000583311 91 ntBASIC22.48■■□□□ 1.19
CPSF7Q8N684 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CPSF7Q8N684 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.48■■□□□ 1.19
CPSF7Q8N684 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPSF7Q8N684 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CPSF7Q8N684 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.47■■□□□ 1.19
CPSF7Q8N684 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.47■■□□□ 1.19
CPSF7Q8N684 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPSF7Q8N684 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CPSF7Q8N684 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPSF7Q8N684 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.47■■□□□ 1.19
CPSF7Q8N684 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
CPSF7Q8N684 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPSF7Q8N684 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPSF7Q8N684 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.46■■□□□ 1.19
CPSF7Q8N684 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPSF7Q8N684 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CPSF7Q8N684 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.46■■□□□ 1.19
CPSF7Q8N684 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.46■■□□□ 1.19
CPSF7Q8N684 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPSF7Q8N684 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPSF7Q8N684 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPSF7Q8N684 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.45■■□□□ 1.18
CPSF7Q8N684 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.45■■□□□ 1.18
CPSF7Q8N684 RAP2CP1-202ENST00000605179 643 ntBASIC22.45■■□□□ 1.18
CPSF7Q8N684 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.45■■□□□ 1.18
CPSF7Q8N684 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPSF7Q8N684 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPSF7Q8N684 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPSF7Q8N684 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPSF7Q8N684 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPSF7Q8N684 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPSF7Q8N684 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPSF7Q8N684 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CPSF7Q8N684 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
CPSF7Q8N684 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.43■■□□□ 1.18
CPSF7Q8N684 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPSF7Q8N684 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPSF7Q8N684 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms