Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
USP31Q70CQ4 AC135279.3-201ENST00000610945 1311 ntBASIC31.42■■■□□ 2.62
USP31Q70CQ4 SLC6A10P-202ENST00000431994 2058 ntBASIC31.42■■■□□ 2.62
USP31Q70CQ4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
USP31Q70CQ4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP31Q70CQ4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP31Q70CQ4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.41■■■□□ 2.62
USP31Q70CQ4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
USP31Q70CQ4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP31Q70CQ4 AC024257.2-201ENST00000549699 147 ntBASIC31.4■■■□□ 2.62
USP31Q70CQ4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.4■■■□□ 2.62
USP31Q70CQ4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
USP31Q70CQ4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
USP31Q70CQ4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.39■■■□□ 2.62
USP31Q70CQ4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
USP31Q70CQ4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
USP31Q70CQ4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
USP31Q70CQ4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP31Q70CQ4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP31Q70CQ4 EDA-201ENST00000338901 1233 ntBASIC31.38■■■□□ 2.61
USP31Q70CQ4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP31Q70CQ4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
USP31Q70CQ4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.38■■■□□ 2.61
USP31Q70CQ4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.38■■■□□ 2.61
USP31Q70CQ4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
USP31Q70CQ4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP31Q70CQ4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP31Q70CQ4 AC142381.2-201ENST00000566120 298 ntBASIC31.37■■■□□ 2.61
USP31Q70CQ4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.37■■■□□ 2.61
USP31Q70CQ4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP31Q70CQ4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP31Q70CQ4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.37■■■□□ 2.61
USP31Q70CQ4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP31Q70CQ4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP31Q70CQ4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
USP31Q70CQ4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.36■■■□□ 2.61
USP31Q70CQ4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
USP31Q70CQ4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.36■■■□□ 2.61
USP31Q70CQ4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP31Q70CQ4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.36■■■□□ 2.61
USP31Q70CQ4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
USP31Q70CQ4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP31Q70CQ4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
USP31Q70CQ4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP31Q70CQ4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP31Q70CQ4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
USP31Q70CQ4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
USP31Q70CQ4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.34■■■□□ 2.61
USP31Q70CQ4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP31Q70CQ4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.34■■■□□ 2.61
USP31Q70CQ4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.34■■■□□ 2.61
USP31Q70CQ4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP31Q70CQ4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.33■■■□□ 2.61
USP31Q70CQ4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.33■■■□□ 2.61
USP31Q70CQ4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
USP31Q70CQ4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP31Q70CQ4 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.32■■■□□ 2.6
USP31Q70CQ4 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.32■■■□□ 2.6
USP31Q70CQ4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP31Q70CQ4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.32■■■□□ 2.6
USP31Q70CQ4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP31Q70CQ4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.32■■■□□ 2.6
USP31Q70CQ4 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.32■■■□□ 2.6
USP31Q70CQ4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
USP31Q70CQ4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
USP31Q70CQ4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
USP31Q70CQ4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP31Q70CQ4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
USP31Q70CQ4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
USP31Q70CQ4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP31Q70CQ4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.3■■■□□ 2.6
USP31Q70CQ4 AL355001.2-201ENST00000620617 1191 ntBASIC31.3■■■□□ 2.6
USP31Q70CQ4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.3■■■□□ 2.6
USP31Q70CQ4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP31Q70CQ4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
USP31Q70CQ4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
USP31Q70CQ4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
USP31Q70CQ4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.29■■■□□ 2.6
USP31Q70CQ4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
USP31Q70CQ4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
USP31Q70CQ4 RARRES2P6-201ENST00000567333 442 ntBASIC31.29■■■□□ 2.6
USP31Q70CQ4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.28■■■□□ 2.6
USP31Q70CQ4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.28■■■□□ 2.6
USP31Q70CQ4 AC091060.1-201ENST00000623524 1766 ntBASIC31.28■■■□□ 2.6
USP31Q70CQ4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
USP31Q70CQ4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.28■■■□□ 2.6
USP31Q70CQ4 DUX4L19-201ENST00000557448 1267 ntBASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms