Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.3■■□□□ 1.48
SNX30Q5VWJ9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.3■■□□□ 1.48
SNX30Q5VWJ9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.3■■□□□ 1.48
SNX30Q5VWJ9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNX30Q5VWJ9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 SNX5-217ENST00000606557 1087 ntBASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
SNX30Q5VWJ9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 MTDHP2-201ENST00000601468 714 ntBASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.28■■□□□ 1.48
SNX30Q5VWJ9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 MIR6724-1-201ENST00000616420 92 ntBASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 MIR6724-2-201ENST00000616483 92 ntBASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 MIR6724-4-201ENST00000617390 92 ntBASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 MIR6724-3-201ENST00000622482 92 ntBASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.27■■□□□ 1.48
SNX30Q5VWJ9 MIR6722-201ENST00000617286 78 ntBASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.26■■□□□ 1.47
SNX30Q5VWJ9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNX30Q5VWJ9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.24■■□□□ 1.47
SNX30Q5VWJ9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.23■■□□□ 1.47
SNX30Q5VWJ9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 AC004448.1-201ENST00000458332 883 ntBASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SNX30Q5VWJ9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 MIR3621-201ENST00000580529 85 ntBASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
SNX30Q5VWJ9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.2■■□□□ 1.47
SNX30Q5VWJ9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SNX30Q5VWJ9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.2■■□□□ 1.46
SNX30Q5VWJ9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.2■■□□□ 1.46
SNX30Q5VWJ9 AL117332.1-201ENST00000622628 974 ntBASIC24.2■■□□□ 1.46
SNX30Q5VWJ9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SNX30Q5VWJ9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SNX30Q5VWJ9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNX30Q5VWJ9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms