Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC6A12P48065 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC6A12P48065 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC6A12P48065 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A12P48065 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A12P48065 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A12P48065 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A12P48065 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.4■■□□□ 1.18
SLC6A12P48065 AC103834.1-201ENST00000520383 144 ntBASIC22.4■■□□□ 1.18
SLC6A12P48065 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC6A12P48065 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC6A12P48065 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC6A12P48065 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
SLC6A12P48065 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC6A12P48065 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
SLC6A12P48065 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC6A12P48065 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC6A12P48065 ABCB10P4-201ENST00000566803 2184 ntBASIC22.39■■□□□ 1.17
SLC6A12P48065 AL161729.1-201ENST00000604104 1402 ntBASIC22.39■■□□□ 1.17
SLC6A12P48065 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC6A12P48065 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC6A12P48065 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A12P48065 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
SLC6A12P48065 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A12P48065 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.38■■□□□ 1.17
SLC6A12P48065 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A12P48065 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A12P48065 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A12P48065 THA1P-201ENST00000590384 1145 ntBASIC22.37■■□□□ 1.17
SLC6A12P48065 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A12P48065 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A12P48065 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A12P48065 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC6A12P48065 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.36■■□□□ 1.17
SLC6A12P48065 MIR4281-201ENST00000580852 62 ntBASIC22.36■■□□□ 1.17
SLC6A12P48065 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.36■■□□□ 1.17
SLC6A12P48065 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A12P48065 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A12P48065 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SLC6A12P48065 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC6A12P48065 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.36■■□□□ 1.17
SLC6A12P48065 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC6A12P48065 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A12P48065 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A12P48065 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.35■■□□□ 1.17
SLC6A12P48065 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.35■■□□□ 1.17
SLC6A12P48065 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A12P48065 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC6A12P48065 AC131274.2-201ENST00000580697 1507 ntBASIC22.35■■□□□ 1.17
SLC6A12P48065 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.34■■□□□ 1.17
SLC6A12P48065 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.34■■□□□ 1.17
SLC6A12P48065 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SLC6A12P48065 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC6A12P48065 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SLC6A12P48065 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SLC6A12P48065 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.34■■□□□ 1.17
SLC6A12P48065 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SLC6A12P48065 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SLC6A12P48065 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC6A12P48065 AF131216.4-201ENST00000638924 1588 ntBASIC22.33■■□□□ 1.17
SLC6A12P48065 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
SLC6A12P48065 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC6A12P48065 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.33■■□□□ 1.17
SLC6A12P48065 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC6A12P48065 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 AL022069.1-201ENST00000568025 1636 ntBASIC22.32■■□□□ 1.16
SLC6A12P48065 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC6A12P48065 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.32■■□□□ 1.16
SLC6A12P48065 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC6A12P48065 KRT8P33-201ENST00000508125 1423 ntBASIC22.31■■□□□ 1.16
SLC6A12P48065 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SLC6A12P48065 AC103724.3-201ENST00000564481 992 ntBASIC22.31■■□□□ 1.16
SLC6A12P48065 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SLC6A12P48065 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC6A12P48065 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SLC6A12P48065 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.31■■□□□ 1.16
SLC6A12P48065 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC6A12P48065 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SLC6A12P48065 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms