Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL358852.1-201ENST00000623174 1268 ntBASIC31.09■■■□□ 2.57
RXRBP28702 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
RXRBP28702 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.09■■■□□ 2.57
RXRBP28702 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RXRBP28702 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.08■■■□□ 2.57
RXRBP28702 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RXRBP28702 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RXRBP28702 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
RXRBP28702 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.08■■■□□ 2.57
RXRBP28702 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RXRBP28702 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC31.08■■■□□ 2.57
RXRBP28702 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
RXRBP28702 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
RXRBP28702 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.07■■■□□ 2.56
RXRBP28702 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RXRBP28702 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.06■■■□□ 2.56
RXRBP28702 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
RXRBP28702 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
RXRBP28702 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RXRBP28702 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RXRBP28702 AL355802.2-201ENST00000402069 882 ntBASIC31.05■■■□□ 2.56
RXRBP28702 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RXRBP28702 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.05■■■□□ 2.56
RXRBP28702 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.04■■■□□ 2.56
RXRBP28702 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RXRBP28702 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
RXRBP28702 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
RXRBP28702 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RXRBP28702 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RXRBP28702 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
RXRBP28702 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RXRBP28702 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RXRBP28702 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
RXRBP28702 CDCA4P2-201ENST00000441182 718 ntBASIC31.03■■■□□ 2.56
RXRBP28702 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.03■■■□□ 2.56
RXRBP28702 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.03■■■□□ 2.56
RXRBP28702 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.02■■■□□ 2.56
RXRBP28702 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RXRBP28702 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.02■■■□□ 2.56
RXRBP28702 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.02■■■□□ 2.56
RXRBP28702 AC126544.1-201ENST00000580842 1059 ntBASIC31.02■■■□□ 2.56
RXRBP28702 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
RXRBP28702 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RXRBP28702 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
RXRBP28702 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
RXRBP28702 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
RXRBP28702 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
RXRBP28702 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.01■■■□□ 2.55
RXRBP28702 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RXRBP28702 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RXRBP28702 CD99P1-205ENST00000527459 561 ntBASIC31.01■■■□□ 2.55
RXRBP28702 TSPY26P-201ENST00000476365 1326 ntBASIC31■■■□□ 2.55
RXRBP28702 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RXRBP28702 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RXRBP28702 MAP2K4P1-201ENST00000438453 1195 ntBASIC31■■■□□ 2.55
RXRBP28702 KRT18P14-201ENST00000534205 1250 ntBASIC31■■■□□ 2.55
RXRBP28702 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31■■■□□ 2.55
RXRBP28702 MIR6084-201ENST00000622012 110 ntBASIC31■■■□□ 2.55
RXRBP28702 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
RXRBP28702 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RXRBP28702 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
RXRBP28702 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RXRBP28702 TSPY20P-201ENST00000450910 630 ntBASIC30.99■■■□□ 2.55
RXRBP28702 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.99■■■□□ 2.55
RXRBP28702 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.99■■■□□ 2.55
RXRBP28702 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.99■■■□□ 2.55
RXRBP28702 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
RXRBP28702 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
RXRBP28702 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
RXRBP28702 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RXRBP28702 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.98■■■□□ 2.55
RXRBP28702 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.98■■■□□ 2.55
RXRBP28702 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC30.98■■■□□ 2.55
RXRBP28702 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 AC073111.5-205ENST00000641717 521 ntBASIC30.98■■■□□ 2.55
RXRBP28702 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RXRBP28702 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RXRBP28702 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
RXRBP28702 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.97■■■□□ 2.55
RXRBP28702 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.97■■■□□ 2.55
RXRBP28702 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
RXRBP28702 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.97■■■□□ 2.55
RXRBP28702 AC090877.2-201ENST00000558441 1738 ntBASIC30.97■■■□□ 2.55
RXRBP28702 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RXRBP28702 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RXRBP28702 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RXRBP28702 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.96■■■□□ 2.55
RXRBP28702 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC30.96■■■□□ 2.55
RXRBP28702 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.96■■■□□ 2.55
RXRBP28702 AL109923.1-201ENST00000618799 583 ntBASIC30.96■■■□□ 2.55
RXRBP28702 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RXRBP28702 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
RXRBP28702 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
RXRBP28702 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 431.7 ms