Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
COL1A2P08123 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL1A2P08123 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.62■■□□□ 1.69
COL1A2P08123 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
COL1A2P08123 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A2P08123 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A2P08123 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A2P08123 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A2P08123 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
COL1A2P08123 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A2P08123 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.6■■□□□ 1.69
COL1A2P08123 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A2P08123 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A2P08123 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
COL1A2P08123 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
COL1A2P08123 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.59■■□□□ 1.69
COL1A2P08123 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.59■■□□□ 1.69
COL1A2P08123 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
COL1A2P08123 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL1A2P08123 AC005703.6-201ENST00000623265 1329 ntBASIC25.59■■□□□ 1.69
COL1A2P08123 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL1A2P08123 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
COL1A2P08123 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL1A2P08123 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.58■■□□□ 1.69
COL1A2P08123 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.58■■□□□ 1.69
COL1A2P08123 AL139246.5-201ENST00000606645 996 ntBASIC25.58■■□□□ 1.69
COL1A2P08123 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL1A2P08123 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL1A2P08123 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL1A2P08123 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL1A2P08123 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
COL1A2P08123 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.57■■□□□ 1.68
COL1A2P08123 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.57■■□□□ 1.68
COL1A2P08123 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
COL1A2P08123 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL1A2P08123 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL1A2P08123 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.57■■□□□ 1.68
COL1A2P08123 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL1A2P08123 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL1A2P08123 AL022069.1-201ENST00000568025 1636 ntBASIC25.57■■□□□ 1.68
COL1A2P08123 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL1A2P08123 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL1A2P08123 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.55■■□□□ 1.68
COL1A2P08123 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
COL1A2P08123 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL1A2P08123 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL1A2P08123 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 MIR638-201ENST00000385237 100 ntBASIC25.54■■□□□ 1.68
COL1A2P08123 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.54■■□□□ 1.68
COL1A2P08123 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.54■■□□□ 1.68
COL1A2P08123 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL1A2P08123 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.53■■□□□ 1.68
COL1A2P08123 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL1A2P08123 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.53■■□□□ 1.68
COL1A2P08123 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL1A2P08123 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.52■■□□□ 1.68
COL1A2P08123 AC110285.6-201ENST00000617652 491 ntBASIC25.52■■□□□ 1.68
COL1A2P08123 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL1A2P08123 AL161729.1-201ENST00000604104 1402 ntBASIC25.51■■□□□ 1.67
COL1A2P08123 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.51■■□□□ 1.67
COL1A2P08123 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.51■■□□□ 1.67
COL1A2P08123 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL1A2P08123 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.5■■□□□ 1.67
COL1A2P08123 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL1A2P08123 AC096631.2-201ENST00000436136 790 ntBASIC25.5■■□□□ 1.67
COL1A2P08123 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.5■■□□□ 1.67
COL1A2P08123 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.5■■□□□ 1.67
COL1A2P08123 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
COL1A2P08123 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.49■■□□□ 1.67
COL1A2P08123 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL1A2P08123 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.49■■□□□ 1.67
COL1A2P08123 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.49■■□□□ 1.67
COL1A2P08123 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL1A2P08123 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL1A2P08123 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.48■■□□□ 1.67
COL1A2P08123 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.48■■□□□ 1.67
COL1A2P08123 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL1A2P08123 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL1A2P08123 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL1A2P08123 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
COL1A2P08123 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL1A2P08123 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL1A2P08123 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
COL1A2P08123 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL1A2P08123 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL1A2P08123 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.47■■□□□ 1.67
COL1A2P08123 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL1A2P08123 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms