Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SNAI2O43623 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAI2O43623 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAI2O43623 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAI2O43623 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAI2O43623 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAI2O43623 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAI2O43623 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNAI2O43623 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAI2O43623 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SNAI2O43623 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.12■□□□□ 0.33
SNAI2O43623 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNAI2O43623 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNAI2O43623 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
SNAI2O43623 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNAI2O43623 ABCB10P4-201ENST00000566803 2184 ntBASIC17.11■□□□□ 0.33
SNAI2O43623 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 AC025884.2-201ENST00000553429 711 ntBASIC17.11■□□□□ 0.33
SNAI2O43623 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNAI2O43623 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAI2O43623 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SNAI2O43623 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAI2O43623 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNAI2O43623 MIR3960-201ENST00000583311 91 ntBASIC17.1■□□□□ 0.33
SNAI2O43623 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNAI2O43623 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAI2O43623 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SNAI2O43623 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAI2O43623 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAI2O43623 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNAI2O43623 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.09■□□□□ 0.33
SNAI2O43623 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.09■□□□□ 0.33
SNAI2O43623 CR559946.2-201ENST00000623684 991 ntBASIC17.09■□□□□ 0.33
SNAI2O43623 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.09■□□□□ 0.33
SNAI2O43623 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAI2O43623 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAI2O43623 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAI2O43623 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAI2O43623 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SNAI2O43623 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.08■□□□□ 0.33
SNAI2O43623 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.08■□□□□ 0.33
SNAI2O43623 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNAI2O43623 ZNRF2P2-203ENST00000454624 420 ntBASIC17.08■□□□□ 0.32
SNAI2O43623 AL157400.5-201ENST00000507624 621 ntBASIC17.08■□□□□ 0.32
SNAI2O43623 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAI2O43623 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNAI2O43623 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNAI2O43623 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNAI2O43623 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.07■□□□□ 0.32
SNAI2O43623 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNAI2O43623 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAI2O43623 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAI2O43623 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.07■□□□□ 0.32
SNAI2O43623 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAI2O43623 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAI2O43623 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAI2O43623 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNAI2O43623 HLA-L-211ENST00000482052 1765 ntBASIC17.07■□□□□ 0.32
SNAI2O43623 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNAI2O43623 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNAI2O43623 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNAI2O43623 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.06■□□□□ 0.32
SNAI2O43623 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 RPS2P35-201ENST00000443417 897 ntBASIC17.06■□□□□ 0.32
SNAI2O43623 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.06■□□□□ 0.32
SNAI2O43623 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAI2O43623 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms