Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.74■■■□□ 2.03
DDX4Q9NQI0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
DDX4Q9NQI0 AC096631.2-201ENST00000436136 790 ntBASIC27.73■■■□□ 2.03
DDX4Q9NQI0 DUSP8P4-201ENST00000399538 1761 ntBASIC27.73■■■□□ 2.03
DDX4Q9NQI0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.73■■■□□ 2.03
DDX4Q9NQI0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
DDX4Q9NQI0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
DDX4Q9NQI0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.72■■■□□ 2.03
DDX4Q9NQI0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
DDX4Q9NQI0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.71■■■□□ 2.03
DDX4Q9NQI0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
DDX4Q9NQI0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX4Q9NQI0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.03
DDX4Q9NQI0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.7■■■□□ 2.02
DDX4Q9NQI0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
DDX4Q9NQI0 AC091060.1-201ENST00000623524 1766 ntBASIC27.7■■■□□ 2.02
DDX4Q9NQI0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
DDX4Q9NQI0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 AC004448.1-201ENST00000458332 883 ntBASIC27.68■■■□□ 2.02
DDX4Q9NQI0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.68■■■□□ 2.02
DDX4Q9NQI0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
DDX4Q9NQI0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 MIR935-201ENST00000401179 91 ntBASIC27.67■■■□□ 2.02
DDX4Q9NQI0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX4Q9NQI0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
DDX4Q9NQI0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
DDX4Q9NQI0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.66■■■□□ 2.02
DDX4Q9NQI0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
DDX4Q9NQI0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.66■■■□□ 2.02
DDX4Q9NQI0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX4Q9NQI0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.65■■■□□ 2.02
DDX4Q9NQI0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
DDX4Q9NQI0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX4Q9NQI0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.65■■■□□ 2.02
DDX4Q9NQI0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX4Q9NQI0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.64■■■□□ 2.02
DDX4Q9NQI0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.64■■■□□ 2.02
DDX4Q9NQI0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.64■■■□□ 2.02
DDX4Q9NQI0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.64■■■□□ 2.02
DDX4Q9NQI0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.64■■■□□ 2.01
DDX4Q9NQI0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
DDX4Q9NQI0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
DDX4Q9NQI0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 AC131274.2-201ENST00000580697 1507 ntBASIC27.62■■■□□ 2.01
DDX4Q9NQI0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
DDX4Q9NQI0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 AC005837.3-201ENST00000612163 286 ntBASIC27.61■■■□□ 2.01
DDX4Q9NQI0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
DDX4Q9NQI0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
DDX4Q9NQI0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX4Q9NQI0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX4Q9NQI0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.59■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms