Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCDH11XQ9BZA7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
PCDH11XQ9BZA7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.57■■■□□ 2.48
PCDH11XQ9BZA7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 AL355001.2-201ENST00000620617 1191 ntBASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 AC010501.1-201ENST00000606270 1962 ntBASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PCDH11XQ9BZA7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDH11XQ9BZA7 AC026271.2-201ENST00000428091 497 ntBASIC30.55■■■□□ 2.48
PCDH11XQ9BZA7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDH11XQ9BZA7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
PCDH11XQ9BZA7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDH11XQ9BZA7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PCDH11XQ9BZA7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.54■■■□□ 2.48
PCDH11XQ9BZA7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
PCDH11XQ9BZA7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCDH11XQ9BZA7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
PCDH11XQ9BZA7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.53■■■□□ 2.48
PCDH11XQ9BZA7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.53■■■□□ 2.48
PCDH11XQ9BZA7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
PCDH11XQ9BZA7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
PCDH11XQ9BZA7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
PCDH11XQ9BZA7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
PCDH11XQ9BZA7 AC005703.6-201ENST00000623265 1329 ntBASIC30.51■■■□□ 2.47
PCDH11XQ9BZA7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDH11XQ9BZA7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.5■■■□□ 2.47
PCDH11XQ9BZA7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.5■■■□□ 2.47
PCDH11XQ9BZA7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PCDH11XQ9BZA7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDH11XQ9BZA7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.49■■■□□ 2.47
PCDH11XQ9BZA7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.49■■■□□ 2.47
PCDH11XQ9BZA7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
PCDH11XQ9BZA7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
PCDH11XQ9BZA7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.49■■■□□ 2.47
PCDH11XQ9BZA7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDH11XQ9BZA7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.48■■■□□ 2.47
PCDH11XQ9BZA7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDH11XQ9BZA7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
PCDH11XQ9BZA7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PCDH11XQ9BZA7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.48■■■□□ 2.47
PCDH11XQ9BZA7 AC105265.2-201ENST00000467189 838 ntBASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 DUX4L19-201ENST00000557448 1267 ntBASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 AF213884.3-201ENST00000563833 479 ntBASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDH11XQ9BZA7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 MIR939-201ENST00000401314 82 ntBASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 AL136967.2-201ENST00000623968 743 ntBASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.46■■■□□ 2.47
PCDH11XQ9BZA7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PCDH11XQ9BZA7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
PCDH11XQ9BZA7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.45■■■□□ 2.47
PCDH11XQ9BZA7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PCDH11XQ9BZA7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.45■■■□□ 2.46
PCDH11XQ9BZA7 AP001330.3-201ENST00000520123 633 ntBASIC30.45■■■□□ 2.46
PCDH11XQ9BZA7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.45■■■□□ 2.46
PCDH11XQ9BZA7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PCDH11XQ9BZA7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
PCDH11XQ9BZA7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PCDH11XQ9BZA7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.44■■■□□ 2.46
PCDH11XQ9BZA7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDH11XQ9BZA7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.43■■■□□ 2.46
PCDH11XQ9BZA7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.43■■■□□ 2.46
PCDH11XQ9BZA7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.43■■■□□ 2.46
PCDH11XQ9BZA7 AC092666.2-201ENST00000613287 246 ntBASIC30.43■■■□□ 2.46
PCDH11XQ9BZA7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PCDH11XQ9BZA7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PCDH11XQ9BZA7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms