Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 GRAMD4P4-201ENST00000613563 1115 ntBASIC12.24□□□□□ -0.45
KRTAP4-1Q9BYQ7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 MIR939-201ENST00000401314 82 ntBASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 SRD5A1P1-201ENST00000442297 786 ntBASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 AP001330.3-201ENST00000520123 633 ntBASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP4-1Q9BYQ7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 AC104564.3-201ENST00000582367 638 ntBASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP4-1Q9BYQ7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 AC087623.3-201ENST00000607047 1098 ntBASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 MIR5787-201ENST00000611784 55 ntBASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.21□□□□□ -0.45
KRTAP4-1Q9BYQ7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC12.21□□□□□ -0.46
KRTAP4-1Q9BYQ7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
KRTAP4-1Q9BYQ7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 AC004448.1-201ENST00000458332 883 ntBASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 AC097639.1-201ENST00000565519 1891 ntBASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP4-1Q9BYQ7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 MIR4767-201ENST00000582827 78 ntBASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
KRTAP4-1Q9BYQ7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 SERBP1P1-201ENST00000396021 1160 ntBASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 MIR6821-201ENST00000617625 74 ntBASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KRTAP4-1Q9BYQ7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms