Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC020928.2-201ENST00000588717 2197 ntBASIC20.55■□□□□ 0.88
USB1Q9BQ65 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.55■□□□□ 0.88
USB1Q9BQ65 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USB1Q9BQ65 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
USB1Q9BQ65 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USB1Q9BQ65 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USB1Q9BQ65 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.54■□□□□ 0.88
USB1Q9BQ65 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.54■□□□□ 0.88
USB1Q9BQ65 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.54■□□□□ 0.88
USB1Q9BQ65 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USB1Q9BQ65 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.54■□□□□ 0.88
USB1Q9BQ65 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.53■□□□□ 0.88
USB1Q9BQ65 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.53■□□□□ 0.88
USB1Q9BQ65 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USB1Q9BQ65 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
USB1Q9BQ65 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.53■□□□□ 0.88
USB1Q9BQ65 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.53■□□□□ 0.88
USB1Q9BQ65 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USB1Q9BQ65 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USB1Q9BQ65 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USB1Q9BQ65 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
USB1Q9BQ65 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USB1Q9BQ65 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USB1Q9BQ65 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.52■□□□□ 0.88
USB1Q9BQ65 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.52■□□□□ 0.88
USB1Q9BQ65 AC090877.2-201ENST00000558441 1738 ntBASIC20.52■□□□□ 0.88
USB1Q9BQ65 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USB1Q9BQ65 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USB1Q9BQ65 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USB1Q9BQ65 ERN1-208ENST00000606895 2068 ntBASIC20.51■□□□□ 0.87
USB1Q9BQ65 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
USB1Q9BQ65 AL356441.2-201ENST00000443009 864 ntBASIC20.51■□□□□ 0.87
USB1Q9BQ65 AC092028.1-203ENST00000608262 953 ntBASIC20.51■□□□□ 0.87
USB1Q9BQ65 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USB1Q9BQ65 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USB1Q9BQ65 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.5■□□□□ 0.87
USB1Q9BQ65 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USB1Q9BQ65 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USB1Q9BQ65 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.5■□□□□ 0.87
USB1Q9BQ65 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USB1Q9BQ65 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USB1Q9BQ65 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USB1Q9BQ65 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USB1Q9BQ65 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USB1Q9BQ65 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
USB1Q9BQ65 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.49■□□□□ 0.87
USB1Q9BQ65 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USB1Q9BQ65 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USB1Q9BQ65 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USB1Q9BQ65 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
USB1Q9BQ65 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USB1Q9BQ65 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USB1Q9BQ65 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USB1Q9BQ65 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
USB1Q9BQ65 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
USB1Q9BQ65 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USB1Q9BQ65 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
USB1Q9BQ65 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.47■□□□□ 0.87
USB1Q9BQ65 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
USB1Q9BQ65 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USB1Q9BQ65 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USB1Q9BQ65 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
USB1Q9BQ65 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.47■□□□□ 0.87
USB1Q9BQ65 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USB1Q9BQ65 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USB1Q9BQ65 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USB1Q9BQ65 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.46■□□□□ 0.87
USB1Q9BQ65 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.46■□□□□ 0.87
USB1Q9BQ65 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.46■□□□□ 0.87
USB1Q9BQ65 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USB1Q9BQ65 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.46■□□□□ 0.87
USB1Q9BQ65 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.46■□□□□ 0.87
USB1Q9BQ65 CLDN5-201ENST00000403084 2357 ntBASIC20.46■□□□□ 0.87
USB1Q9BQ65 DUSP8P4-201ENST00000399538 1761 ntBASIC20.46■□□□□ 0.87
USB1Q9BQ65 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USB1Q9BQ65 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
USB1Q9BQ65 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
USB1Q9BQ65 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 AC093323.1-202ENST00000635031 2045 ntBASIC20.45■□□□□ 0.86
USB1Q9BQ65 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.45■□□□□ 0.86
USB1Q9BQ65 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.45■□□□□ 0.86
USB1Q9BQ65 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USB1Q9BQ65 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USB1Q9BQ65 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.44■□□□□ 0.86
USB1Q9BQ65 KRT16P3-201ENST00000439127 1283 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms