Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 AL355001.2-201ENST00000620617 1191 ntBASIC22.94■■□□□ 1.26
PCDH15Q96QU1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.93■■□□□ 1.26
PCDH15Q96QU1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDH15Q96QU1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 AL136967.2-201ENST00000623968 743 ntBASIC22.92■■□□□ 1.26
PCDH15Q96QU1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH15Q96QU1 AC096887.2-201ENST00000623443 1957 ntBASIC22.91■■□□□ 1.26
PCDH15Q96QU1 SRD5A1P1-201ENST00000442297 786 ntBASIC22.91■■□□□ 1.26
PCDH15Q96QU1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH15Q96QU1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH15Q96QU1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDH15Q96QU1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH15Q96QU1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDH15Q96QU1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH15Q96QU1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH15Q96QU1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH15Q96QU1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.89■■□□□ 1.25
PCDH15Q96QU1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDH15Q96QU1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH15Q96QU1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 MIR6821-201ENST00000617625 74 ntBASIC22.87■■□□□ 1.25
PCDH15Q96QU1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH15Q96QU1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH15Q96QU1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH15Q96QU1 AC097381.1-201ENST00000429019 1296 ntBASIC22.86■■□□□ 1.25
PCDH15Q96QU1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDH15Q96QU1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH15Q96QU1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH15Q96QU1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 DUX4L19-201ENST00000557448 1267 ntBASIC22.85■■□□□ 1.25
PCDH15Q96QU1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 AL121749.1-202ENST00000609313 2153 ntBASIC22.85■■□□□ 1.25
PCDH15Q96QU1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.85■■□□□ 1.25
PCDH15Q96QU1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDH15Q96QU1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDH15Q96QU1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH15Q96QU1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDH15Q96QU1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDH15Q96QU1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDH15Q96QU1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH15Q96QU1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH15Q96QU1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH15Q96QU1 AC087623.3-201ENST00000607047 1098 ntBASIC22.83■■□□□ 1.25
PCDH15Q96QU1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH15Q96QU1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH15Q96QU1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH15Q96QU1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH15Q96QU1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.83■■□□□ 1.24
PCDH15Q96QU1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
PCDH15Q96QU1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH15Q96QU1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH15Q96QU1 AC004448.1-201ENST00000458332 883 ntBASIC22.82■■□□□ 1.24
PCDH15Q96QU1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDH15Q96QU1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH15Q96QU1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH15Q96QU1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
PCDH15Q96QU1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms