Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC103834.1-201ENST00000520383 144 ntBASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 KRT8P33-201ENST00000508125 1423 ntBASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 AP003733.4-201ENST00000623785 1697 ntBASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIMC1Q8NDZ2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.83■■□□□ 1.09
SIMC1Q8NDZ2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SIMC1Q8NDZ2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIMC1Q8NDZ2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SIMC1Q8NDZ2 AC074183.2-201ENST00000623112 922 ntBASIC21.83■■□□□ 1.09
SIMC1Q8NDZ2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SIMC1Q8NDZ2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SIMC1Q8NDZ2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIMC1Q8NDZ2 LINC00543-201ENST00000567234 1845 ntBASIC21.81■■□□□ 1.08
SIMC1Q8NDZ2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SIMC1Q8NDZ2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.81■■□□□ 1.08
SIMC1Q8NDZ2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.81■■□□□ 1.08
SIMC1Q8NDZ2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.81■■□□□ 1.08
SIMC1Q8NDZ2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIMC1Q8NDZ2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 HLA-L-211ENST00000482052 1765 ntBASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.8■■□□□ 1.08
SIMC1Q8NDZ2 LINC01124-201ENST00000409786 2117 ntBASIC21.79■■□□□ 1.08
SIMC1Q8NDZ2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIMC1Q8NDZ2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.79■■□□□ 1.08
SIMC1Q8NDZ2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIMC1Q8NDZ2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIMC1Q8NDZ2 AC090877.2-201ENST00000558441 1738 ntBASIC21.79■■□□□ 1.08
SIMC1Q8NDZ2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SIMC1Q8NDZ2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIMC1Q8NDZ2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SIMC1Q8NDZ2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIMC1Q8NDZ2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIMC1Q8NDZ2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIMC1Q8NDZ2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 MIR4508-201ENST00000584178 70 ntBASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIMC1Q8NDZ2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIMC1Q8NDZ2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 AC120024.1-201ENST00000562672 995 ntBASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIMC1Q8NDZ2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 AC103724.3-201ENST00000564481 992 ntBASIC21.73■■□□□ 1.07
SIMC1Q8NDZ2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms