Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
USP31Q70CQ4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
USP31Q70CQ4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
USP31Q70CQ4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP31Q70CQ4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP31Q70CQ4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
USP31Q70CQ4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP31Q70CQ4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP31Q70CQ4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
USP31Q70CQ4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
USP31Q70CQ4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
USP31Q70CQ4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
USP31Q70CQ4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.58■■■□□ 2.65
USP31Q70CQ4 AL031432.3-201ENST00000607698 485 ntBASIC31.58■■■□□ 2.65
USP31Q70CQ4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
USP31Q70CQ4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
USP31Q70CQ4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
USP31Q70CQ4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
USP31Q70CQ4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.57■■■□□ 2.64
USP31Q70CQ4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
USP31Q70CQ4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
USP31Q70CQ4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
USP31Q70CQ4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.56■■■□□ 2.64
USP31Q70CQ4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
USP31Q70CQ4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
USP31Q70CQ4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
USP31Q70CQ4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP31Q70CQ4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.55■■■□□ 2.64
USP31Q70CQ4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
USP31Q70CQ4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
USP31Q70CQ4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.54■■■□□ 2.64
USP31Q70CQ4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP31Q70CQ4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.52■■■□□ 2.64
USP31Q70CQ4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
USP31Q70CQ4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP31Q70CQ4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP31Q70CQ4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
USP31Q70CQ4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
USP31Q70CQ4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
USP31Q70CQ4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
USP31Q70CQ4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
USP31Q70CQ4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
USP31Q70CQ4 AC131274.2-201ENST00000580697 1507 ntBASIC31.51■■■□□ 2.63
USP31Q70CQ4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.5■■■□□ 2.63
USP31Q70CQ4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP31Q70CQ4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
USP31Q70CQ4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP31Q70CQ4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP31Q70CQ4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.5■■■□□ 2.63
USP31Q70CQ4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP31Q70CQ4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP31Q70CQ4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
USP31Q70CQ4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP31Q70CQ4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
USP31Q70CQ4 UNC93B3-201ENST00000308076 687 ntBASIC31.49■■■□□ 2.63
USP31Q70CQ4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP31Q70CQ4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
USP31Q70CQ4 SUDS3P1-201ENST00000505831 966 ntBASIC31.49■■■□□ 2.63
USP31Q70CQ4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.49■■■□□ 2.63
USP31Q70CQ4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.49■■■□□ 2.63
USP31Q70CQ4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
USP31Q70CQ4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
USP31Q70CQ4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP31Q70CQ4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.48■■■□□ 2.63
USP31Q70CQ4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
USP31Q70CQ4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.48■■■□□ 2.63
USP31Q70CQ4 PBX2P1-201ENST00000493219 1291 ntBASIC31.48■■■□□ 2.63
USP31Q70CQ4 MIR6089-201ENST00000616698 64 ntBASIC31.48■■■□□ 2.63
USP31Q70CQ4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.48■■■□□ 2.63
USP31Q70CQ4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.48■■■□□ 2.63
USP31Q70CQ4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
USP31Q70CQ4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP31Q70CQ4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP31Q70CQ4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
USP31Q70CQ4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
USP31Q70CQ4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP31Q70CQ4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
USP31Q70CQ4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.46■■■□□ 2.63
USP31Q70CQ4 DUSP8P4-201ENST00000399538 1761 ntBASIC31.46■■■□□ 2.63
USP31Q70CQ4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.45■■■□□ 2.63
USP31Q70CQ4 SRD5A1P1-201ENST00000442297 786 ntBASIC31.45■■■□□ 2.63
USP31Q70CQ4 AL136162.1-201ENST00000607711 1078 ntBASIC31.45■■■□□ 2.63
USP31Q70CQ4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
USP31Q70CQ4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.45■■■□□ 2.63
USP31Q70CQ4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
USP31Q70CQ4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
USP31Q70CQ4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
USP31Q70CQ4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.44■■■□□ 2.62
USP31Q70CQ4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
USP31Q70CQ4 ZNRF2P3-201ENST00000424200 374 ntBASIC31.43■■■□□ 2.62
USP31Q70CQ4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.43■■■□□ 2.62
USP31Q70CQ4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP31Q70CQ4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP31Q70CQ4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP31Q70CQ4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP31Q70CQ4 AC005703.6-201ENST00000623265 1329 ntBASIC31.43■■■□□ 2.62
USP31Q70CQ4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.43■■■□□ 2.62
USP31Q70CQ4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP31Q70CQ4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.43■■■□□ 2.62
USP31Q70CQ4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms