Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 AC019171.1-201ENST00000601251 1056 ntBASIC17.96■□□□□ 0.47
TM4SF20Q53R12 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM4SF20Q53R12 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TM4SF20Q53R12 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TM4SF20Q53R12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TM4SF20Q53R12 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF20Q53R12 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF20Q53R12 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF20Q53R12 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TM4SF20Q53R12 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TM4SF20Q53R12 KRT8P33-201ENST00000508125 1423 ntBASIC17.93■□□□□ 0.46
TM4SF20Q53R12 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF20Q53R12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF20Q53R12 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF20Q53R12 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM4SF20Q53R12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF20Q53R12 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF20Q53R12 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF20Q53R12 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 AC022616.5-201ENST00000518796 181 ntBASIC17.89■□□□□ 0.45
TM4SF20Q53R12 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF20Q53R12 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF20Q53R12 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 AP003733.4-201ENST00000623785 1697 ntBASIC17.87■□□□□ 0.45
TM4SF20Q53R12 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 YBX1P4-201ENST00000392794 808 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms