Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.04■□□□□ 0.32
APOC4P55056 MIR6724-1-201ENST00000616420 92 ntBASIC17.04■□□□□ 0.32
APOC4P55056 MIR6724-2-201ENST00000616483 92 ntBASIC17.04■□□□□ 0.32
APOC4P55056 MIR6724-4-201ENST00000617390 92 ntBASIC17.04■□□□□ 0.32
APOC4P55056 MIR6724-3-201ENST00000622482 92 ntBASIC17.04■□□□□ 0.32
APOC4P55056 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.04■□□□□ 0.32
APOC4P55056 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.04■□□□□ 0.32
APOC4P55056 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOC4P55056 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOC4P55056 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
APOC4P55056 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOC4P55056 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOC4P55056 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.03■□□□□ 0.32
APOC4P55056 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APOC4P55056 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APOC4P55056 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOC4P55056 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.03■□□□□ 0.32
APOC4P55056 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.03■□□□□ 0.32
APOC4P55056 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.03■□□□□ 0.32
APOC4P55056 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.03■□□□□ 0.32
APOC4P55056 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.03■□□□□ 0.32
APOC4P55056 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.03■□□□□ 0.32
APOC4P55056 AC008406.3-201ENST00000620001 1374 ntBASIC17.02■□□□□ 0.32
APOC4P55056 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOC4P55056 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
APOC4P55056 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
APOC4P55056 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOC4P55056 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.02■□□□□ 0.32
APOC4P55056 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.02■□□□□ 0.32
APOC4P55056 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOC4P55056 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
APOC4P55056 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APOC4P55056 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOC4P55056 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOC4P55056 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.02■□□□□ 0.31
APOC4P55056 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
APOC4P55056 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC4P55056 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.01■□□□□ 0.31
APOC4P55056 MIR6089-201ENST00000616698 64 ntBASIC17.01■□□□□ 0.31
APOC4P55056 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC4P55056 SLC6A10P-202ENST00000431994 2058 ntBASIC17.01■□□□□ 0.31
APOC4P55056 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOC4P55056 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOC4P55056 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC4P55056 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC4P55056 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17■□□□□ 0.31
APOC4P55056 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APOC4P55056 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17■□□□□ 0.31
APOC4P55056 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17■□□□□ 0.31
APOC4P55056 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17■□□□□ 0.31
APOC4P55056 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APOC4P55056 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17■□□□□ 0.31
APOC4P55056 AL356740.2-201ENST00000601559 647 ntBASIC17■□□□□ 0.31
APOC4P55056 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17■□□□□ 0.31
APOC4P55056 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
APOC4P55056 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
APOC4P55056 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.99■□□□□ 0.31
APOC4P55056 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC4P55056 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC4P55056 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.99■□□□□ 0.31
APOC4P55056 SNX5-217ENST00000606557 1087 ntBASIC16.99■□□□□ 0.31
APOC4P55056 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.99■□□□□ 0.31
APOC4P55056 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC4P55056 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC4P55056 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.98■□□□□ 0.31
APOC4P55056 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APOC4P55056 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APOC4P55056 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
APOC4P55056 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APOC4P55056 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APOC4P55056 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
APOC4P55056 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.98■□□□□ 0.31
APOC4P55056 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.98■□□□□ 0.31
APOC4P55056 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.98■□□□□ 0.31
APOC4P55056 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.98■□□□□ 0.31
APOC4P55056 MIR6722-201ENST00000617286 78 ntBASIC16.98■□□□□ 0.31
APOC4P55056 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.98■□□□□ 0.31
APOC4P55056 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOC4P55056 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.97■□□□□ 0.31
APOC4P55056 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.97■□□□□ 0.31
APOC4P55056 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.97■□□□□ 0.31
APOC4P55056 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.97■□□□□ 0.31
APOC4P55056 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.97■□□□□ 0.31
APOC4P55056 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOC4P55056 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.97■□□□□ 0.31
APOC4P55056 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
APOC4P55056 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
APOC4P55056 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
APOC4P55056 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC4P55056 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC4P55056 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.96■□□□□ 0.31
APOC4P55056 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC4P55056 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.96■□□□□ 0.31
APOC4P55056 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.96■□□□□ 0.31
APOC4P55056 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
APOC4P55056 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC4P55056 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.96■□□□□ 0.3
APOC4P55056 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOC4P55056 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
APOC4P55056 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms