Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBAL3A6NHL2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TUBAL3A6NHL2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.77■□□□□ 0.92
TUBAL3A6NHL2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TUBAL3A6NHL2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 AC092028.1-203ENST00000608262 953 ntBASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 CLDN5-201ENST00000403084 2357 ntBASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBAL3A6NHL2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBAL3A6NHL2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 MIR4281-201ENST00000580852 62 ntBASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 DUSP8P4-201ENST00000399538 1761 ntBASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TUBAL3A6NHL2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TUBAL3A6NHL2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBAL3A6NHL2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.73■□□□□ 0.91
TUBAL3A6NHL2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.73■□□□□ 0.91
TUBAL3A6NHL2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBAL3A6NHL2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBAL3A6NHL2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBAL3A6NHL2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBAL3A6NHL2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBAL3A6NHL2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBAL3A6NHL2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TUBAL3A6NHL2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TUBAL3A6NHL2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TUBAL3A6NHL2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TUBAL3A6NHL2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.7■□□□□ 0.9
TUBAL3A6NHL2 AC011551.1-201ENST00000614101 683 ntBASIC20.7■□□□□ 0.9
TUBAL3A6NHL2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBAL3A6NHL2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 AC010997.5-201ENST00000609182 354 ntBASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TUBAL3A6NHL2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBAL3A6NHL2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 MTDHP2-201ENST00000601468 714 ntBASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBAL3A6NHL2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms