Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV3S1A0A5B6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
TCRBV3S1A0A5B6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV3S1A0A5B6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV3S1A0A5B6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV3S1A0A5B6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV3S1A0A5B6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TCRBV3S1A0A5B6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV3S1A0A5B6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TCRBV3S1A0A5B6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
TCRBV3S1A0A5B6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.81■■□□□ 1.08
TCRBV3S1A0A5B6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.8■■□□□ 1.08
TCRBV3S1A0A5B6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBV3S1A0A5B6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBV3S1A0A5B6 AC126177.7-201ENST00000547904 679 ntBASIC21.79■■□□□ 1.08
TCRBV3S1A0A5B6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TCRBV3S1A0A5B6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TCRBV3S1A0A5B6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV3S1A0A5B6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV3S1A0A5B6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV3S1A0A5B6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
TCRBV3S1A0A5B6 ANOS2P-203ENST00000472227 1816 ntBASIC21.77■■□□□ 1.08
TCRBV3S1A0A5B6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV3S1A0A5B6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TCRBV3S1A0A5B6 DUSP8P3-201ENST00000399571 1760 ntBASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV3S1A0A5B6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 LINC00526-201ENST00000581067 1875 ntBASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV3S1A0A5B6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 C1orf229-201ENST00000623686 2258 ntBASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.74■■□□□ 1.07
TCRBV3S1A0A5B6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TCRBV3S1A0A5B6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 AC092068.2-201ENST00000590491 1708 ntBASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 243.9 ms