Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AC022413.1-201ENST00000624602 984 ntBASIC24.97■■□□□ 1.59
PCDHA13Q9Y5I0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA13Q9Y5I0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA13Q9Y5I0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PCDHA13Q9Y5I0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
PCDHA13Q9Y5I0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA13Q9Y5I0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
PCDHA13Q9Y5I0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 MIR639-201ENST00000384974 98 ntBASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 MIR7108-201ENST00000614319 87 ntBASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 FOXO3B-201ENST00000395675 1928 ntBASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA13Q9Y5I0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
PCDHA13Q9Y5I0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHA13Q9Y5I0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA13Q9Y5I0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 AC007029.1-201ENST00000604183 313 ntBASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA13Q9Y5I0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA13Q9Y5I0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA13Q9Y5I0 RAP2CP1-202ENST00000605179 643 ntBASIC24.89■■□□□ 1.58
PCDHA13Q9Y5I0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA13Q9Y5I0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA13Q9Y5I0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA13Q9Y5I0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA13Q9Y5I0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA13Q9Y5I0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.89■■□□□ 1.57
PCDHA13Q9Y5I0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA13Q9Y5I0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA13Q9Y5I0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PCDHA13Q9Y5I0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHA13Q9Y5I0 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHA13Q9Y5I0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA13Q9Y5I0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA13Q9Y5I0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA13Q9Y5I0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHA13Q9Y5I0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA13Q9Y5I0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA13Q9Y5I0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA13Q9Y5I0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PCDHA13Q9Y5I0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA13Q9Y5I0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA13Q9Y5I0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA13Q9Y5I0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA13Q9Y5I0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA13Q9Y5I0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 KRT18P10-201ENST00000388836 1287 ntBASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 AC026202.3-201ENST00000600805 1127 ntBASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA13Q9Y5I0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHA13Q9Y5I0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
PCDHA13Q9Y5I0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
PCDHA13Q9Y5I0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms